RNA–Protein interactions for RNA: ENST00000498396.2

SLFN11-206, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-206ENST00000498396 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
SLFN11-206ENST00000498396 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
SLFN11-206ENST00000498396 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
SLFN11-206ENST00000498396 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
SLFN11-206ENST00000498396 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
SLFN11-206ENST00000498396 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
SLFN11-206ENST00000498396 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
SLFN11-206ENST00000498396 CCDC93Q567U6 631 aa17.46■□□□□ 0.39
SLFN11-206ENST00000498396 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
SLFN11-206ENST00000498396 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
SLFN11-206ENST00000498396 FER1L6Q2WGJ9 1857 aa17.46■□□□□ 0.38
SLFN11-206ENST00000498396 PTPRCP08575 1304 aa17.46■□□□□ 0.38
SLFN11-206ENST00000498396 PDE8AO60658 829 aa17.45■□□□□ 0.38
SLFN11-206ENST00000498396 CTSWP56202 376 aa17.45■□□□□ 0.38
SLFN11-206ENST00000498396 GRAPQ13588 217 aa17.45■□□□□ 0.38
SLFN11-206ENST00000498396 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
SLFN11-206ENST00000498396 GRAPLQ8TC17 118 aaPredicted RBP17.45■□□□□ 0.38
SLFN11-206ENST00000498396 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
SLFN11-206ENST00000498396 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
SLFN11-206ENST00000498396 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
SLFN11-206ENST00000498396 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
SLFN11-206ENST00000498396 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
SLFN11-206ENST00000498396 LMNB1P20700 586 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
SLFN11-206ENST00000498396 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 GREM2Q9H772 168 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 SBF1O95248 1867 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 LTBP3Q9NS15 1303 aa17.43■□□□□ 0.38
SLFN11-206ENST00000498396 COL4A5P29400 1685 aa17.42■□□□□ 0.38
SLFN11-206ENST00000498396 GRM8O00222 908 aa17.42■□□□□ 0.38
SLFN11-206ENST00000498396 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
SLFN11-206ENST00000498396 NBPF7P0C2Y1 421 aaPredicted RBP17.42■□□□□ 0.38
SLFN11-206ENST00000498396 FOXO4P98177 505 aa17.42■□□□□ 0.38
SLFN11-206ENST00000498396 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
SLFN11-206ENST00000498396 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLFN11-206ENST00000498396 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
SLFN11-206ENST00000498396 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
SLFN11-206ENST00000498396 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
SLFN11-206ENST00000498396 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
SLFN11-206ENST00000498396 PLA2G12BQ9BX93 195 aa17.41■□□□□ 0.38
SLFN11-206ENST00000498396 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
SLFN11-206ENST00000498396 BBOX1O75936 387 aa17.4■□□□□ 0.38
SLFN11-206ENST00000498396 RTKN2Q8IZC4 609 aa17.4■□□□□ 0.38
SLFN11-206ENST00000498396 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
SLFN11-206ENST00000498396 SUCLG2Q96I99 432 aa17.4■□□□□ 0.38
SLFN11-206ENST00000498396 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
SLFN11-206ENST00000498396 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
SLFN11-206ENST00000498396 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
SLFN11-206ENST00000498396 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
SLFN11-206ENST00000498396 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 CSF1RP07333 972 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 TRIM27P14373 513 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 GPSM2P81274 684 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
SLFN11-206ENST00000498396 PSMD1Q99460 953 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 UTYO14607 1347 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
SLFN11-206ENST00000498396 WTIPA6NIX2 430 aaPredicted RBP17.37■□□□□ 0.37
SLFN11-206ENST00000498396 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
SLFN11-206ENST00000498396 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
SLFN11-206ENST00000498396 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
SLFN11-206ENST00000498396 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
SLFN11-206ENST00000498396 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
SLFN11-206ENST00000498396 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
SLFN11-206ENST00000498396 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
SLFN11-206ENST00000498396 ITGA6P23229 1130 aa17.36■□□□□ 0.37
SLFN11-206ENST00000498396 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
SLFN11-206ENST00000498396 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
SLFN11-206ENST00000498396 ANKRD44Q8N8A2 993 aa17.36■□□□□ 0.37
SLFN11-206ENST00000498396 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 MYH3P11055 1940 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 AOC3Q16853 763 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 MPNDQ8N594 471 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 ARHGAP45Q92619 1136 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 RTFDC1Q9BY42 306 aaPredicted RBP17.35■□□□□ 0.37
SLFN11-206ENST00000498396 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
SLFN11-206ENST00000498396 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
SLFN11-206ENST00000498396 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
SLFN11-206ENST00000498396 ANKRD18AQ8IVF6 992 aa17.34■□□□□ 0.37
SLFN11-206ENST00000498396 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
SLFN11-206ENST00000498396 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
SLFN11-206ENST00000498396 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
SLFN11-206ENST00000498396 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
SLFN11-206ENST00000498396 SPEF2Q9C093 1822 aa17.33■□□□□ 0.37
SLFN11-206ENST00000498396 RLBP1P12271 317 aa17.33■□□□□ 0.36
SLFN11-206ENST00000498396 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
SLFN11-206ENST00000498396 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.36
SLFN11-206ENST00000498396 MEIS3Q99687 375 aa17.33■□□□□ 0.36
SLFN11-206ENST00000498396 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
SLFN11-206ENST00000498396 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
SLFN11-206ENST00000498396 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
SLFN11-206ENST00000498396 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
SLFN11-206ENST00000498396 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
SLFN11-206ENST00000498396 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
SLFN11-206ENST00000498396 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
SLFN11-206ENST00000498396 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms