RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 ACAD8Q9UKU7 415 aa8.89□□□□□ -0.99
PDCD4-211ENST00000498367 PABPN1LA6NDY0 278 aaKnown RBP8.88□□□□□ -0.99
PDCD4-211ENST00000498367 H3BRB1 525 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 FLT3P36888 993 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 TNNI2P48788 182 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 LCA5Q86VQ0 697 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 HSCBQ8IWL3 235 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 LMNTD2Q8IXW0 634 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 HPS1Q92902 700 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 TUT1Q9H6E5 874 aaKnown RBP8.88□□□□□ -0.99
PDCD4-211ENST00000498367 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
PDCD4-211ENST00000498367 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 A6NJY4 79 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 CDC45O75419 566 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 WFS1O76024 890 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 BPNT1O95861 308 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 ABL1P00519 1130 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 CDC27P30260 824 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 TNNT2P45379 298 aaPredicted RBP8.87□□□□□ -0.99
PDCD4-211ENST00000498367 ALFQ53S48 1182 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 NBPF10Q6P3W6 841 aaKnown RBP8.87□□□□□ -0.99
PDCD4-211ENST00000498367 SMAP1Q8IYB5 467 aaPredicted RBP8.87□□□□□ -0.99
PDCD4-211ENST00000498367 IFNL3Q8IZI9 196 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 CHCHD4Q8N4Q1 142 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 PRR7Q8TB68 274 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 SLC39A13Q96H72 371 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
PDCD4-211ENST00000498367 SORBS3O60504 671 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 ICMTO60725 284 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 RNASEH2AO75792 299 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 SNRPBP14678 240 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 CHMP4BP1P59074 171 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 ZKSCAN8Q15776 578 aaPredicted RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 FAM133BQ5BKY9 247 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 FBXO31Q5XUX0 539 aaPredicted RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 MYRIPQ8NFW9 859 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 GOLGA1Q92805 767 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 RNPC3Q96LT9 517 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 LRRC27Q9C0I9 530 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
PDCD4-211ENST00000498367 THRAP3Q9Y2W1 955 aaKnown RBP8.86□□□□□ -0.99
PDCD4-211ENST00000498367 SIAH2O43255 324 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 EPHB1P54762 984 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 ALDH1L2Q3SY69 923 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 CCDC184Q52MB2 194 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 ANKRD13BQ86YJ7 626 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 MCF2L2Q86YR7 1114 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
PDCD4-211ENST00000498367 GJD4Q96KN9 370 aaPredicted RBP8.85□□□□□ -0.99
PDCD4-211ENST00000498367 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
PDCD4-211ENST00000498367 FAM13BQ9NYF5 915 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 STK17AQ9UEE5 414 aa8.85□□□□□ -0.99
PDCD4-211ENST00000498367 DDX41Q9UJV9 622 aaKnown RBP8.85□□□□□ -0.99
PDCD4-211ENST00000498367 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 INO80DQ53TQ3 878 aaPredicted RBP8.84□□□□□ -0.99
PDCD4-211ENST00000498367 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 TSR2Q969E8 191 aaKnown RBP8.84□□□□□ -0.99
PDCD4-211ENST00000498367 ERP27Q96DN0 273 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 INTUQ9ULD6 942 aa8.84□□□□□ -0.99
PDCD4-211ENST00000498367 TNFRSF10BO14763 440 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 WIPF1O43516 503 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 TSPAN6O43657 245 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 MTA2O94776 668 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
PDCD4-211ENST00000498367 HNRNPCP07910 306 aaKnown RBP eCLIP8.83□□□□□ -1
PDCD4-211ENST00000498367 DCTN1Q14203 1278 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 UVSSAQ2YD98 709 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 CCDC93Q567U6 631 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 UBE2Q1Q7Z7E8 422 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 NGDNQ8NEJ9 315 aaKnown RBP8.83□□□□□ -1
PDCD4-211ENST00000498367 VTI1BQ9UEU0 232 aa8.83□□□□□ -1
PDCD4-211ENST00000498367 SLC26A4O43511 780 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 C21orf2O43822 256 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 FDX1P10109 184 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
PDCD4-211ENST00000498367 FBXO41Q8TF61 875 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 APPBP2Q92624 585 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 SEZ6LQ9BYH1 1024 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 CXorf56Q9H5V9 222 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
PDCD4-211ENST00000498367 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
PDCD4-211ENST00000498367 PPP2R3BQ9Y5P8 575 aa8.82□□□□□ -1
PDCD4-211ENST00000498367 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms