RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
HPS1-214ENST00000498219 GRAPLQ8TC17 118 aaPredicted RBP18.74■□□□□ 0.59
HPS1-214ENST00000498219 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
HPS1-214ENST00000498219 PDE8AO60658 829 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 GCKRQ14397 625 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 SLC4A10Q6U841 1118 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 LINS1Q8NG48 757 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
HPS1-214ENST00000498219 SPEF2Q9C093 1822 aa18.72■□□□□ 0.59
HPS1-214ENST00000498219 H7C1W4 665 aa18.72■□□□□ 0.59
HPS1-214ENST00000498219 BEND3Q5T5X7 828 aa18.72■□□□□ 0.59
HPS1-214ENST00000498219 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
HPS1-214ENST00000498219 ATP6V0A2Q9Y487 856 aa18.72■□□□□ 0.59
HPS1-214ENST00000498219 BBOX1O75936 387 aa18.71■□□□□ 0.59
HPS1-214ENST00000498219 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
HPS1-214ENST00000498219 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
HPS1-214ENST00000498219 SP8Q8IXZ3 490 aa18.7■□□□□ 0.58
HPS1-214ENST00000498219 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
HPS1-214ENST00000498219 COL4A5P29400 1685 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 LRRC37AA6NMS7 1700 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 CASP7P55210 303 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 CTSWP56202 376 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 CCDC152Q4G0S7 254 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 PSMD1Q99460 953 aa18.69■□□□□ 0.58
HPS1-214ENST00000498219 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
HPS1-214ENST00000498219 KIF3CO14782 793 aa18.68■□□□□ 0.58
HPS1-214ENST00000498219 CT47B1P0C2W7 299 aaPredicted RBP18.68■□□□□ 0.58
HPS1-214ENST00000498219 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
HPS1-214ENST00000498219 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
HPS1-214ENST00000498219 ALDH1L2Q3SY69 923 aa18.68■□□□□ 0.58
HPS1-214ENST00000498219 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
HPS1-214ENST00000498219 RRAGCQ9HB90 399 aa18.68■□□□□ 0.58
HPS1-214ENST00000498219 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
HPS1-214ENST00000498219 RPS8P62241 208 aaKnown RBP18.67■□□□□ 0.58
HPS1-214ENST00000498219 DPP8Q6V1X1 898 aaPredicted RBP18.67■□□□□ 0.58
HPS1-214ENST00000498219 MPNDQ8N594 471 aa18.67■□□□□ 0.58
HPS1-214ENST00000498219 SRCIN1Q9C0H9 1055 aa18.67■□□□□ 0.58
HPS1-214ENST00000498219 GREM2Q9H772 168 aa18.67■□□□□ 0.58
HPS1-214ENST00000498219 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
HPS1-214ENST00000498219 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
HPS1-214ENST00000498219 DUOX1Q9NRD9 1551 aa18.66■□□□□ 0.58
HPS1-214ENST00000498219 ZNF541Q9H0D2 1346 aa18.66■□□□□ 0.58
HPS1-214ENST00000498219 BCAR3O75815 825 aa18.65■□□□□ 0.58
HPS1-214ENST00000498219 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
HPS1-214ENST00000498219 GPSM2P81274 684 aa18.65■□□□□ 0.58
HPS1-214ENST00000498219 AOC3Q16853 763 aa18.65■□□□□ 0.58
HPS1-214ENST00000498219 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
HPS1-214ENST00000498219 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
HPS1-214ENST00000498219 PTPRCP08575 1304 aa18.65■□□□□ 0.58
HPS1-214ENST00000498219 PPIP5K2O43314 1243 aa18.64■□□□□ 0.57
HPS1-214ENST00000498219 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
HPS1-214ENST00000498219 GRIPAP1Q4V328 841 aa18.64■□□□□ 0.57
HPS1-214ENST00000498219 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
HPS1-214ENST00000498219 GPR101Q96P66 508 aaPredicted RBP18.64■□□□□ 0.57
HPS1-214ENST00000498219 PLA2G12BQ9BX93 195 aa18.64■□□□□ 0.57
HPS1-214ENST00000498219 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
HPS1-214ENST00000498219 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
HPS1-214ENST00000498219 LTBP1Q14766 1721 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 GRM8O00222 908 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 C1QTNF8P60827 252 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 FAM161AQ3B820 660 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 ANKRD18AQ8IVF6 992 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
HPS1-214ENST00000498219 WDR90Q96KV7 1748 aa18.63■□□□□ 0.57
HPS1-214ENST00000498219 FOXO4P98177 505 aa18.62■□□□□ 0.57
HPS1-214ENST00000498219 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
HPS1-214ENST00000498219 JDP2Q8WYK2 163 aa18.62■□□□□ 0.57
HPS1-214ENST00000498219 CHMP3Q9Y3E7 222 aa18.62■□□□□ 0.57
HPS1-214ENST00000498219 POTECB2RU33 542 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 FZD9O00144 591 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 CSF1RP07333 972 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 ITGA6P23229 1130 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
HPS1-214ENST00000498219 RTL9Q8NET4 1388 aa18.6■□□□□ 0.57
HPS1-214ENST00000498219 C6orf229H3BNL8 230 aa18.6■□□□□ 0.57
HPS1-214ENST00000498219 RIMBP2O15034 1052 aa18.6■□□□□ 0.57
HPS1-214ENST00000498219 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
HPS1-214ENST00000498219 NIM1KQ8IY84 436 aa18.6■□□□□ 0.57
HPS1-214ENST00000498219 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
HPS1-214ENST00000498219 CDC5LQ99459 802 aaKnown RBP18.6■□□□□ 0.57
HPS1-214ENST00000498219 LMBR1LQ6UX01 489 aa18.59■□□□□ 0.57
HPS1-214ENST00000498219 ANKIB1Q9P2G1 1089 aa18.59■□□□□ 0.57
HPS1-214ENST00000498219 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
HPS1-214ENST00000498219 WTIPA6NIX2 430 aaPredicted RBP18.58■□□□□ 0.56
HPS1-214ENST00000498219 BRPF1P55201 1214 aaPredicted RBP18.58■□□□□ 0.56
HPS1-214ENST00000498219 EIF6P56537 245 aaKnown RBP18.58■□□□□ 0.56
HPS1-214ENST00000498219 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
HPS1-214ENST00000498219 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
HPS1-214ENST00000498219 TBC1D16Q8TBP0 767 aa18.58■□□□□ 0.56
HPS1-214ENST00000498219 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
HPS1-214ENST00000498219 KAZALD1Q96I82 304 aa18.58■□□□□ 0.56
HPS1-214ENST00000498219 TNNQ9UQP3 1299 aa18.58■□□□□ 0.56
HPS1-214ENST00000498219 UFL1O94874 794 aa18.57■□□□□ 0.56
HPS1-214ENST00000498219 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
HPS1-214ENST00000498219 IGHMBP2P38935 993 aaKnown RBP18.57■□□□□ 0.56
HPS1-214ENST00000498219 WASHC4Q2M389 1173 aa18.57■□□□□ 0.56
HPS1-214ENST00000498219 MINPP1Q9UNW1 487 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms