RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 MEIS3Q99687 375 aa24.7■■□□□ 1.54
HLA-DPB1-217ENST00000498038 LAMB2P55268 1798 aa24.7■■□□□ 1.54
HLA-DPB1-217ENST00000498038 COL11A2P13942 1736 aaPredicted RBP24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 GNAI3P08754 354 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 ALDH1B1P30837 517 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 HOXA10P31260 410 aaPredicted RBP24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 FOXO4P98177 505 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 DALRD3Q5D0E6 543 aaKnown RBP24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 TTLL6Q8N841 843 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 TTLL11Q8NHH1 800 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 COG6Q9Y2V7 657 aa24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 SUPT16HQ9Y5B9 1047 aaKnown RBP24.69■■□□□ 1.54
HLA-DPB1-217ENST00000498038 EPHA10Q5JZY3 1008 aa24.68■■□□□ 1.54
HLA-DPB1-217ENST00000498038 CRAMP1Q96RY5 1269 aa24.68■■□□□ 1.54
HLA-DPB1-217ENST00000498038 BCS1LQ9Y276 419 aa24.68■■□□□ 1.54
HLA-DPB1-217ENST00000498038 KAZALD1Q96I82 304 aa24.67■■□□□ 1.54
HLA-DPB1-217ENST00000498038 HDAC5Q9UQL6 1122 aa24.67■■□□□ 1.54
HLA-DPB1-217ENST00000498038 CSF1RP07333 972 aa24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 MVPQ14764 893 aaKnown RBP24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 LMBR1LQ6UX01 489 aa24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 BICC1Q9H694 974 aaKnown RBP24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 CHMP3Q9Y3E7 222 aa24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 DLEC1Q9Y238 1755 aa24.66■■□□□ 1.54
HLA-DPB1-217ENST00000498038 ZBTB7BO15156 539 aaPredicted RBP24.65■■□□□ 1.54
HLA-DPB1-217ENST00000498038 GPR162Q16538 588 aa24.65■■□□□ 1.54
HLA-DPB1-217ENST00000498038 GREM2Q9H772 168 aa24.65■■□□□ 1.54
HLA-DPB1-217ENST00000498038 SEC31BQ9NQW1 1179 aa24.65■■□□□ 1.54
HLA-DPB1-217ENST00000498038 ZNF219Q9P2Y4 722 aaPredicted RBP24.65■■□□□ 1.54
HLA-DPB1-217ENST00000498038 PRPF40BQ6NWY9 871 aaKnown RBP24.64■■□□□ 1.54
HLA-DPB1-217ENST00000498038 LRRFIP2Q9Y608 721 aaKnown RBP24.64■■□□□ 1.54
HLA-DPB1-217ENST00000498038 GRAPQ13588 217 aa24.63■■□□□ 1.53
HLA-DPB1-217ENST00000498038 GRAPLQ8TC17 118 aaPredicted RBP24.63■■□□□ 1.53
HLA-DPB1-217ENST00000498038 DDX19BQ9UMR2 479 aa24.63■■□□□ 1.53
HLA-DPB1-217ENST00000498038 GNAI2P04899 355 aa24.62■■□□□ 1.53
HLA-DPB1-217ENST00000498038 FAM161AQ3B820 660 aa24.62■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CELF1Q92879 486 aaKnown RBP24.62■■□□□ 1.53
HLA-DPB1-217ENST00000498038 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 BBOX1O75936 387 aa24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 YBX3P16989 372 aaKnown RBP eCLIP24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 ITGA6P23229 1130 aa24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 ANKRD44Q8N8A2 993 aa24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 MYH3P11055 1940 aa24.61■■□□□ 1.53
HLA-DPB1-217ENST00000498038 BRCA1P38398 1863 aaKnown RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 RTL9Q8NET4 1388 aa24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 ANKRD18BA2A2Z9 1011 aa24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 PPEF1O14829 653 aaPredicted RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 C21orf2O43822 256 aa24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 RPS8P62241 208 aaKnown RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 IFIT5Q13325 482 aaKnown RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 RABL6Q3YEC7 729 aaPredicted RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CDC5LQ99459 802 aaKnown RBP24.6■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
HLA-DPB1-217ENST00000498038 ANKRD18AQ8IVF6 992 aa24.59■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CHMP4BQ9H444 224 aaKnown RBP24.59■■□□□ 1.53
HLA-DPB1-217ENST00000498038 C1orf115Q9H7X2 142 aa24.58■■□□□ 1.53
HLA-DPB1-217ENST00000498038 SLX4Q8IY92 1834 aa24.58■■□□□ 1.53
HLA-DPB1-217ENST00000498038 CACNA1SQ13698 1873 aa24.58■■□□□ 1.52
HLA-DPB1-217ENST00000498038 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
HLA-DPB1-217ENST00000498038 TAF1P21675 1872 aa24.57■■□□□ 1.52
HLA-DPB1-217ENST00000498038 IGHMBP2P38935 993 aaKnown RBP24.56■■□□□ 1.52
HLA-DPB1-217ENST00000498038 TAF7LQ5H9L4 462 aa24.56■■□□□ 1.52
HLA-DPB1-217ENST00000498038 OLFM4Q6UX06 510 aa24.56■■□□□ 1.52
HLA-DPB1-217ENST00000498038 C7orf43Q8WVR3 580 aa24.56■■□□□ 1.52
HLA-DPB1-217ENST00000498038 ATP6V0A2Q9Y487 856 aa24.56■■□□□ 1.52
HLA-DPB1-217ENST00000498038 TMC4Q7Z404 712 aa24.55■■□□□ 1.52
HLA-DPB1-217ENST00000498038 SP8Q8IXZ3 490 aa24.55■■□□□ 1.52
HLA-DPB1-217ENST00000498038 ZNF594Q96JF6 807 aaPredicted RBP24.55■■□□□ 1.52
HLA-DPB1-217ENST00000498038 CRBNQ96SW2 442 aa24.55■■□□□ 1.52
HLA-DPB1-217ENST00000498038 COL4A1P02462 1669 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 GRIN3BO60391 1043 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 SOGA3Q5TF21 947 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 ARHGAP27Q6ZUM4 889 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 SLC51AQ86UW1 340 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 MPHOSPH8Q99549 860 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 ZBTB40Q9NUA8 1239 aa24.54■■□□□ 1.52
HLA-DPB1-217ENST00000498038 CCDC93Q567U6 631 aa24.52■■□□□ 1.52
HLA-DPB1-217ENST00000498038 CC2D2BQ6DHV5 1058 aa24.52■■□□□ 1.52
HLA-DPB1-217ENST00000498038 BSDC1Q9NW68 430 aaPredicted RBP24.52■■□□□ 1.52
HLA-DPB1-217ENST00000498038 ARFGEF1Q9Y6D6 1849 aa24.51■■□□□ 1.51
HLA-DPB1-217ENST00000498038 SRGAP3O43295 1099 aa24.51■■□□□ 1.51
HLA-DPB1-217ENST00000498038 ATP8B2P98198 1209 aa24.5■■□□□ 1.51
HLA-DPB1-217ENST00000498038 MTX1Q13505 466 aa24.5■■□□□ 1.51
HLA-DPB1-217ENST00000498038 LDHAL6AQ6ZMR3 332 aa24.5■■□□□ 1.51
HLA-DPB1-217ENST00000498038 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
HLA-DPB1-217ENST00000498038 KLHDC4Q8TBB5 520 aa24.5■■□□□ 1.51
HLA-DPB1-217ENST00000498038 RFX5P48382 616 aaPredicted RBP24.49■■□□□ 1.51
HLA-DPB1-217ENST00000498038 IRX6P78412 446 aaPredicted RBP24.49■■□□□ 1.51
HLA-DPB1-217ENST00000498038 CNNM1Q9NRU3 951 aa24.49■■□□□ 1.51
HLA-DPB1-217ENST00000498038 PNMA6EA0A0J9YXQ4 647 aa24.48■■□□□ 1.51
HLA-DPB1-217ENST00000498038 GRIPAP1Q4V328 841 aa24.48■■□□□ 1.51
HLA-DPB1-217ENST00000498038 MINPP1Q9UNW1 487 aa24.48■■□□□ 1.51
HLA-DPB1-217ENST00000498038 GPSM2P81274 684 aa24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 PTPN12Q05209 780 aaKnown RBP24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 CEP85Q6P2H3 762 aa24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 MPNDQ8N594 471 aa24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 PUS3Q9BZE2 481 aaKnown RBP24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 NSFL1CQ9UNZ2 370 aaKnown RBP24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 SPEF2Q9C093 1822 aa24.47■■□□□ 1.51
HLA-DPB1-217ENST00000498038 DPP8Q6V1X1 898 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms