RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 PDRG1Q9NUG6 133 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 POLA2Q14181 598 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 GRPEL1Q9HAV7 217 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 PCDH11XQ9BZA7 1347 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 PCDH11YQ9BZA8 1340 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 CWC25Q9NXE8 425 aaPredicted RBP9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
HLA-DMB-262ENST00000498020 CASTP20810 708 aaKnown RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 PDCP20941 246 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 KRT32Q14532 448 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 BLOC1S2Q6QNY1 142 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 CNBD1Q8NA66 436 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 JARID2Q92833 1246 aaPredicted RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 SUCLG2Q96I99 432 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 EIF6P56537 245 aaKnown RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 INTS4Q96HW7 963 aaKnown RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 AKAP12Q02952 1782 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 SGSM2O43147 1006 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 MYO1BO43795 1136 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 GCKRQ14397 625 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 PROSER3Q2NL68 480 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 KLHL40Q2TBA0 621 aa9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
HLA-DMB-262ENST00000498020 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 MYCP01106 439 aaPredicted RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 CCDC158Q5M9N0 1113 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 ABT1Q9ULW3 272 aaKnown RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 NOC3LQ8WTT2 800 aaKnown RBP9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 RAI14Q9P0K7 980 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 RGS12O14924 1447 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 MTX1Q13505 466 aa9.48□□□□□ -0.89
HLA-DMB-262ENST00000498020 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 H3BQV1 296 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 SPATA31A3Q5VYP0 1347 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 USP16Q9Y5T5 823 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 RAD50Q92878 1312 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 LMBR1LQ6UX01 489 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 FLAD1Q8NFF5 587 aa9.47□□□□□ -0.89
HLA-DMB-262ENST00000498020 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 HSPA4P34932 840 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 KIF2CQ99661 725 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 AKAP2Q9Y2D5 859 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 METTL24Q5JXM2 366 aa9.46□□□□□ -0.89
HLA-DMB-262ENST00000498020 HMG20BQ9P0W2 317 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 LRP2BPQ9P2M1 347 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 YY1P25490 414 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 TTC39AQ5SRH9 613 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 FAM43AQ8N2R8 423 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 AIDAQ96BJ3 306 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
HLA-DMB-262ENST00000498020 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 IL15P40933 162 aaPredicted RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 VTI1AQ96AJ9 217 aa9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 IQSEC3Q9UPP2 1182 aaPredicted RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 RBM8AQ9Y5S9 174 aaKnown RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 U3KPZ7 1027 aaPredicted RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 MPHOSPH10O00566 681 aaKnown RBP9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 TPM3P06753 285 aa9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 FEZ1Q99689 392 aa9.45□□□□□ -0.9
HLA-DMB-262ENST00000498020 LETM1O95202 739 aaPredicted RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 FKBP4Q02790 459 aaKnown RBP eCLIP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 CCDC83Q8IWF9 413 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 SPATA31A6Q5VVP1 1343 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 CCDC173Q0VFZ6 552 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 TNS3Q68CZ2 1445 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 ADCY9O60503 1353 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 CCDC171Q6TFL3 1326 aa9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 RRP12Q5JTH9 1297 aaKnown RBP9.44□□□□□ -0.9
HLA-DMB-262ENST00000498020 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms