RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-212ENST00000497993 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-212ENST00000497993 NFATC2IPQ8NCF5 419 aa8.19□□□□□ -1.1
TMEM39A-212ENST00000497993 MAFBQ9Y5Q3 323 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-212ENST00000497993 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 ZC3H6P61129 1189 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 NPHP3Q7Z494 1330 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 CLSPNQ9HAW4 1339 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 CDK12Q9NYV4 1490 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 NRKQ7Z2Y5 1582 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 PLCH1Q4KWH8 1693 aa8.18□□□□□ -1.1
TMEM39A-212ENST00000497993 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 TIMP2P16035 220 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 RAB15P59190 212 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 Q6ZNB5 142 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 GIPC2Q8TF65 315 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 UBXN4Q92575 508 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 UCN2Q96RP3 112 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
TMEM39A-212ENST00000497993 AXIN1O15169 862 aa8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 LZTS3O60299 673 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 VAMP1P23763 118 aa8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 LRRC59Q96AG4 307 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
TMEM39A-212ENST00000497993 TNS3Q68CZ2 1445 aa8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 POLR3AO14802 1390 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 L3MBTL2Q969R5 705 aa8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 PRAM1Q96QH2 718 aa8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 RGS17Q9UGC6 210 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
TMEM39A-212ENST00000497993 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 ATP9BO43861 1147 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 TRAF7Q6Q0C0 670 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 ORAI2Q96SN7 254 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 DOLKQ9UPQ8 538 aa8.14□□□□□ -1.11
TMEM39A-212ENST00000497993 COL14A1Q05707 1796 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 PRR36Q9H6K5 1346 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 SOWAHDA6NJG2 315 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 USP4Q13107 963 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 CC2D2BQ6DHV5 1058 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 Q6ZVU0 165 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 STK26Q9P289 416 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 SLIT2O94813 1529 aa8.13□□□□□ -1.11
TMEM39A-212ENST00000497993 ARHGEF10O15013 1369 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 SPATA31A3Q5VYP0 1347 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 PIK3CDO00329 1044 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 LILRA1O75019 489 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 SKIP12755 728 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 SIN3AQ96ST3 1273 aa8.12□□□□□ -1.11
TMEM39A-212ENST00000497993 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 WNK3Q9BYP7 1800 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 TSGA10IPQ3SY00 556 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 CYLDQ9NQC7 956 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 TRAK1Q9UPV9 953 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 SSH2Q76I76 1423 aa8.11□□□□□ -1.11
TMEM39A-212ENST00000497993 BRWD3Q6RI45 1802 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 ABCC6O95255 1503 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 EML3Q32P44 896 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 NBPF8Q3BBV2 869 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 PLEKHM2Q8IWE5 1019 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 MEIOBQ8N635 442 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 POGKQ9P215 609 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 ATRNO75882 1429 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 COL18A1P39060 1754 aa8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 ROCK2O75116 1388 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-212ENST00000497993 SLIT3O75094 1523 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms