RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, humanhuman

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM164-208ENST00000497754 PCNTO95613 3336 aa28.31■■■□□ 2.12
TMEM164-208ENST00000497754 ITGBL1O95965 494 aaPredicted RBP28.31■■■□□ 2.12
TMEM164-208ENST00000497754 SF3B3Q15393 1217 aaKnown RBP28.31■■■□□ 2.12
TMEM164-208ENST00000497754 RIC3Q7Z5B4 369 aa28.31■■■□□ 2.12
TMEM164-208ENST00000497754 COL4A1P02462 1669 aa28.31■■■□□ 2.12
TMEM164-208ENST00000497754 SCNN1DP51172 638 aa28.3■■■□□ 2.12
TMEM164-208ENST00000497754 GOLGA2Q08379 1002 aa28.3■■■□□ 2.12
TMEM164-208ENST00000497754 CCDC27Q2M243 656 aa28.3■■■□□ 2.12
TMEM164-208ENST00000497754 DPP8Q6V1X1 898 aaPredicted RBP28.3■■■□□ 2.12
TMEM164-208ENST00000497754 TMC4Q7Z404 712 aa28.3■■■□□ 2.12
TMEM164-208ENST00000497754 MPNDQ8N594 471 aa28.3■■■□□ 2.12
TMEM164-208ENST00000497754 CLEC11AQ9Y240 323 aa28.28■■■□□ 2.12
TMEM164-208ENST00000497754 LMOD1P29536 600 aaPredicted RBP28.27■■■□□ 2.12
TMEM164-208ENST00000497754 TSPYL6Q8N831 410 aa28.27■■■□□ 2.12
TMEM164-208ENST00000497754 ZNRF3Q9ULT6 936 aa28.27■■■□□ 2.12
TMEM164-208ENST00000497754 KIAA2012Q0VF49 1180 aa28.26■■■□□ 2.11
TMEM164-208ENST00000497754 RTL5Q5HYW3 569 aaPredicted RBP28.26■■■□□ 2.11
TMEM164-208ENST00000497754 CCDC30Q5VVM6 783 aa28.26■■■□□ 2.11
TMEM164-208ENST00000497754 CELF1Q92879 486 aaKnown RBP28.26■■■□□ 2.11
TMEM164-208ENST00000497754 CHMP4AQ9BY43 222 aa28.26■■■□□ 2.11
TMEM164-208ENST00000497754 IRS4O14654 1257 aaPredicted RBP28.25■■■□□ 2.11
TMEM164-208ENST00000497754 EPS15P42566 896 aa28.25■■■□□ 2.11
TMEM164-208ENST00000497754 WWC1Q8IX03 1113 aa28.25■■■□□ 2.11
TMEM164-208ENST00000497754 ZBTB38Q8NAP3 1195 aaPredicted RBP28.25■■■□□ 2.11
TMEM164-208ENST00000497754 TSR2Q969E8 191 aaKnown RBP28.25■■■□□ 2.11
TMEM164-208ENST00000497754 MYD88Q99836 296 aa28.25■■■□□ 2.11
TMEM164-208ENST00000497754 CXCL9Q07325 125 aa28.24■■■□□ 2.11
TMEM164-208ENST00000497754 MAP1SQ66K74 1059 aaPredicted RBP28.24■■■□□ 2.11
TMEM164-208ENST00000497754 CNTROBQ8N137 903 aa28.24■■■□□ 2.11
TMEM164-208ENST00000497754 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
TMEM164-208ENST00000497754 NCBP3Q53F19 620 aaKnown RBP28.23■■■□□ 2.11
TMEM164-208ENST00000497754 CCDC191Q8NCU4 936 aa28.22■■■□□ 2.11
TMEM164-208ENST00000497754 METTL22Q9BUU2 404 aaPredicted RBP28.22■■■□□ 2.11
TMEM164-208ENST00000497754 MKRN1Q9UHC7 482 aaKnown RBP28.22■■■□□ 2.11
TMEM164-208ENST00000497754 CNTNAP1P78357 1384 aa28.22■■■□□ 2.11
TMEM164-208ENST00000497754 TMEM88BA6NKF7 163 aa28.21■■■□□ 2.11
TMEM164-208ENST00000497754 DDX58O95786 925 aaKnown RBP28.21■■■□□ 2.11
TMEM164-208ENST00000497754 MRS2Q9HD23 443 aa28.21■■■□□ 2.11
TMEM164-208ENST00000497754 PCCAP05165 728 aaPredicted RBP28.2■■■□□ 2.1
TMEM164-208ENST00000497754 USP50Q70EL3 339 aaPredicted RBP28.2■■■□□ 2.1
TMEM164-208ENST00000497754 GPRC5DQ9NZD1 345 aa28.2■■■□□ 2.1
TMEM164-208ENST00000497754 IL16Q14005 1332 aa28.19■■■□□ 2.1
TMEM164-208ENST00000497754 ANP32CO43423 234 aa28.19■■■□□ 2.1
TMEM164-208ENST00000497754 CWC25Q9NXE8 425 aaPredicted RBP28.19■■■□□ 2.1
TMEM164-208ENST00000497754 TRPM7Q96QT4 1865 aa28.19■■■□□ 2.1
TMEM164-208ENST00000497754 HSPA1AP0DMV8 641 aaKnown RBP28.18■■■□□ 2.1
TMEM164-208ENST00000497754 HSPA1BP0DMV9 641 aaKnown RBP28.18■■■□□ 2.1
TMEM164-208ENST00000497754 HSP90B1P14625 803 aaKnown RBP28.18■■■□□ 2.1
TMEM164-208ENST00000497754 CIAPIN1Q6FI81 312 aa28.18■■■□□ 2.1
TMEM164-208ENST00000497754 NSFL1CQ9UNZ2 370 aaKnown RBP28.18■■■□□ 2.1
TMEM164-208ENST00000497754 MAP3K2Q9Y2U5 619 aa28.18■■■□□ 2.1
TMEM164-208ENST00000497754 CACNA1FO60840 1977 aa28.18■■■□□ 2.1
TMEM164-208ENST00000497754 MYH3P11055 1940 aa28.18■■■□□ 2.1
TMEM164-208ENST00000497754 YDJCA8MPS7 323 aa28.17■■■□□ 2.1
TMEM164-208ENST00000497754 RPS8P62241 208 aaKnown RBP28.17■■■□□ 2.1
TMEM164-208ENST00000497754 GMPSP49915 693 aaPredicted RBP28.16■■■□□ 2.1
TMEM164-208ENST00000497754 GPSM2P81274 684 aa28.16■■■□□ 2.1
TMEM164-208ENST00000497754 TWISTNBQ3B726 338 aaPredicted RBP28.16■■■□□ 2.1
TMEM164-208ENST00000497754 KSR2Q6VAB6 950 aa28.16■■■□□ 2.1
TMEM164-208ENST00000497754 ADARB2Q9NS39 739 aaKnown RBP28.16■■■□□ 2.1
TMEM164-208ENST00000497754 POLLQ9UGP5 575 aa28.16■■■□□ 2.1
TMEM164-208ENST00000497754 CDHR2Q9BYE9 1310 aa28.16■■■□□ 2.1
TMEM164-208ENST00000497754 RAD17O75943 681 aa28.15■■■□□ 2.1
TMEM164-208ENST00000497754 TNIP1Q15025 636 aa28.15■■■□□ 2.1
TMEM164-208ENST00000497754 WASHC4Q2M389 1173 aa28.15■■■□□ 2.1
TMEM164-208ENST00000497754 STK31Q9BXU1 1019 aa28.15■■■□□ 2.1
TMEM164-208ENST00000497754 SEC31BQ9NQW1 1179 aa28.15■■■□□ 2.1
TMEM164-208ENST00000497754 PI4KAP2A4QPH2 592 aa28.14■■■□□ 2.1
TMEM164-208ENST00000497754 PDE8AO60658 829 aa28.14■■■□□ 2.1
TMEM164-208ENST00000497754 COL13A1Q5TAT6 717 aaPredicted RBP28.14■■■□□ 2.1
TMEM164-208ENST00000497754 PI4KAP1Q8N8J0 262 aa28.14■■■□□ 2.1
TMEM164-208ENST00000497754 JARID2Q92833 1246 aaPredicted RBP28.14■■■□□ 2.1
TMEM164-208ENST00000497754 IGKV5-2P06315 115 aa28.13■■■□□ 2.09
TMEM164-208ENST00000497754 CCDC152Q4G0S7 254 aa28.12■■■□□ 2.09
TMEM164-208ENST00000497754 C6orf229H3BNL8 230 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 G2E3Q7L622 706 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 TBC1D16Q8TBP0 767 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 BCL2L13Q9BXK5 485 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 PODXL2Q9NZ53 605 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 FANCIQ9NVI1 1328 aa28.11■■■□□ 2.09
TMEM164-208ENST00000497754 SCN9AQ15858 1988 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 RASSF10A6NK89 507 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 RIMBP2O15034 1052 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 VEGFBP49765 207 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 EYA3Q99504 573 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 DBNDD1Q9H9R9 158 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 SPEF2Q9C093 1822 aa28.1■■■□□ 2.09
TMEM164-208ENST00000497754 SLC4A2P04920 1241 aa28.09■■■□□ 2.09
TMEM164-208ENST00000497754 FMR1Q06787 632 aaKnown RBP eCLIP28.09■■■□□ 2.09
TMEM164-208ENST00000497754 WDR63Q8IWG1 891 aa28.09■■■□□ 2.09
TMEM164-208ENST00000497754 NEXNQ0ZGT2 675 aa28.08■■■□□ 2.09
TMEM164-208ENST00000497754 PGAP2Q9UHJ9 254 aa28.08■■■□□ 2.09
TMEM164-208ENST00000497754 PSME4Q14997 1843 aa28.07■■■□□ 2.08
TMEM164-208ENST00000497754 PSMD14O00487 310 aa28.07■■■□□ 2.08
TMEM164-208ENST00000497754 CWF19L2Q2TBE0 894 aaKnown RBP28.07■■■□□ 2.08
TMEM164-208ENST00000497754 DEFB115Q30KQ5 88 aa28.07■■■□□ 2.08
TMEM164-208ENST00000497754 GPR101Q96P66 508 aaPredicted RBP28.07■■■□□ 2.08
TMEM164-208ENST00000497754 CCDC85AQ96PX6 553 aaPredicted RBP28.07■■■□□ 2.08
TMEM164-208ENST00000497754 CNOT7Q9UIV1 285 aaKnown RBP28.07■■■□□ 2.08
TMEM164-208ENST00000497754 NEURL1BA8MQ27 555 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms