RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
VPS26A-209ENST00000497564 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
VPS26A-209ENST00000497564 CNBD1Q8NA66 436 aa17.66■□□□□ 0.42
VPS26A-209ENST00000497564 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
VPS26A-209ENST00000497564 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
VPS26A-209ENST00000497564 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
VPS26A-209ENST00000497564 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-209ENST00000497564 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-209ENST00000497564 UBE3BQ7Z3V4 1068 aa17.65■□□□□ 0.42
VPS26A-209ENST00000497564 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
VPS26A-209ENST00000497564 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 ARHGAP27Q6ZUM4 889 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-209ENST00000497564 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
VPS26A-209ENST00000497564 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
VPS26A-209ENST00000497564 GPTP24298 496 aa17.63■□□□□ 0.41
VPS26A-209ENST00000497564 NUCB1Q02818 461 aa17.63■□□□□ 0.41
VPS26A-209ENST00000497564 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-209ENST00000497564 H0YIN7 160 aa17.62■□□□□ 0.41
VPS26A-209ENST00000497564 NPHP1O15259 732 aa17.62■□□□□ 0.41
VPS26A-209ENST00000497564 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
VPS26A-209ENST00000497564 ST5P78524 1137 aa17.61■□□□□ 0.41
VPS26A-209ENST00000497564 FOXO4P98177 505 aa17.61■□□□□ 0.41
VPS26A-209ENST00000497564 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
VPS26A-209ENST00000497564 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
VPS26A-209ENST00000497564 PDE6BP35913 854 aa17.6■□□□□ 0.41
VPS26A-209ENST00000497564 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
VPS26A-209ENST00000497564 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
VPS26A-209ENST00000497564 ZNF622Q969S3 477 aaKnown RBP eCLIP17.6■□□□□ 0.41
VPS26A-209ENST00000497564 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
VPS26A-209ENST00000497564 TNRC6CQ9HCJ0 1690 aaKnown RBP17.6■□□□□ 0.41
VPS26A-209ENST00000497564 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
VPS26A-209ENST00000497564 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
VPS26A-209ENST00000497564 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
VPS26A-209ENST00000497564 SRGNP10124 158 aa17.58■□□□□ 0.4
VPS26A-209ENST00000497564 RASSF7Q02833 373 aa17.58■□□□□ 0.4
VPS26A-209ENST00000497564 ERFEQ4G0M1 354 aa17.58■□□□□ 0.4
VPS26A-209ENST00000497564 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.4
VPS26A-209ENST00000497564 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
VPS26A-209ENST00000497564 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
VPS26A-209ENST00000497564 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
VPS26A-209ENST00000497564 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.4
VPS26A-209ENST00000497564 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
VPS26A-209ENST00000497564 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 NTSR2O95665 410 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 PRELPP51888 382 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
VPS26A-209ENST00000497564 ZNF526Q8TF50 670 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-209ENST00000497564 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 SH3TC1Q8TE82 1336 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
VPS26A-209ENST00000497564 CSF1RP07333 972 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
VPS26A-209ENST00000497564 RFX5P48382 616 aaPredicted RBP17.56■□□□□ 0.4
VPS26A-209ENST00000497564 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
VPS26A-209ENST00000497564 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-209ENST00000497564 C21orf2O43822 256 aa17.55■□□□□ 0.4
VPS26A-209ENST00000497564 PDE8AO60658 829 aa17.55■□□□□ 0.4
VPS26A-209ENST00000497564 PDE4AP27815 886 aa17.55■□□□□ 0.4
VPS26A-209ENST00000497564 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-209ENST00000497564 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
VPS26A-209ENST00000497564 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
VPS26A-209ENST00000497564 SBF1O95248 1867 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 NFKBIEO00221 500 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
VPS26A-209ENST00000497564 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
VPS26A-209ENST00000497564 STYK1Q6J9G0 422 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
VPS26A-209ENST00000497564 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 MASTLQ96GX5 879 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
VPS26A-209ENST00000497564 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
VPS26A-209ENST00000497564 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 LRRCC1Q9C099 1032 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-209ENST00000497564 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
VPS26A-209ENST00000497564 NPR1P16066 1061 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 RGS3P49796 1198 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 CTSWP56202 376 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
VPS26A-209ENST00000497564 CRY2Q49AN0 593 aa17.51■□□□□ 0.39
VPS26A-209ENST00000497564 TTLL11Q8NHH1 800 aa17.51■□□□□ 0.39
VPS26A-209ENST00000497564 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms