RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
FAM3A-220ENST00000497506 NBPF7P0C2Y1 421 aaPredicted RBP20.48■□□□□ 0.87
FAM3A-220ENST00000497506 CTSWP56202 376 aa20.48■□□□□ 0.87
FAM3A-220ENST00000497506 CLUAP1Q96AJ1 413 aa20.48■□□□□ 0.87
FAM3A-220ENST00000497506 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
FAM3A-220ENST00000497506 COL4A1P02462 1669 aa20.48■□□□□ 0.87
FAM3A-220ENST00000497506 C21orf2O43822 256 aa20.47■□□□□ 0.87
FAM3A-220ENST00000497506 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
FAM3A-220ENST00000497506 TTLL11Q8NHH1 800 aa20.47■□□□□ 0.87
FAM3A-220ENST00000497506 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
FAM3A-220ENST00000497506 FOXO4P98177 505 aa20.46■□□□□ 0.87
FAM3A-220ENST00000497506 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
FAM3A-220ENST00000497506 CSF1RP07333 972 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 GRAPQ13588 217 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 ARHGAP27Q6ZUM4 889 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
FAM3A-220ENST00000497506 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 SUCLG2Q96I99 432 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
FAM3A-220ENST00000497506 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
FAM3A-220ENST00000497506 PPEF1O14829 653 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-220ENST00000497506 BBOX1O75936 387 aa20.44■□□□□ 0.86
FAM3A-220ENST00000497506 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
FAM3A-220ENST00000497506 SLC51AQ86UW1 340 aa20.44■□□□□ 0.86
FAM3A-220ENST00000497506 CELF1Q92879 486 aaKnown RBP20.44■□□□□ 0.86
FAM3A-220ENST00000497506 UTRNP46939 3433 aa20.44■□□□□ 0.86
FAM3A-220ENST00000497506 RTL9Q8NET4 1388 aa20.44■□□□□ 0.86
FAM3A-220ENST00000497506 CHD4Q14839 1912 aa20.43■□□□□ 0.86
FAM3A-220ENST00000497506 RLBP1P12271 317 aa20.43■□□□□ 0.86
FAM3A-220ENST00000497506 DZIP1LQ8IYY4 767 aaKnown RBP20.43■□□□□ 0.86
FAM3A-220ENST00000497506 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
FAM3A-220ENST00000497506 GREM2Q9H772 168 aa20.43■□□□□ 0.86
FAM3A-220ENST00000497506 SOGA3Q5TF21 947 aa20.42■□□□□ 0.86
FAM3A-220ENST00000497506 SNED1Q8TER0 1413 aa20.42■□□□□ 0.86
FAM3A-220ENST00000497506 NFKBIEO00221 500 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 PLIN1O60240 522 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 RPS8P62241 208 aaKnown RBP20.41■□□□□ 0.86
FAM3A-220ENST00000497506 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
FAM3A-220ENST00000497506 MEIS3Q99687 375 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 ATP6V0A2Q9Y487 856 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 LRRC37AA6NMS7 1700 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 SBF1O95248 1867 aa20.41■□□□□ 0.86
FAM3A-220ENST00000497506 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
FAM3A-220ENST00000497506 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
FAM3A-220ENST00000497506 SP8Q8IXZ3 490 aa20.4■□□□□ 0.86
FAM3A-220ENST00000497506 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
FAM3A-220ENST00000497506 ITGA6P23229 1130 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 RASSF7Q02833 373 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 RABL6Q3YEC7 729 aaPredicted RBP20.39■□□□□ 0.85
FAM3A-220ENST00000497506 TMC4Q7Z404 712 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 BICC1Q9H694 974 aaKnown RBP20.39■□□□□ 0.85
FAM3A-220ENST00000497506 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
FAM3A-220ENST00000497506 PRELPP51888 382 aa20.38■□□□□ 0.85
FAM3A-220ENST00000497506 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
FAM3A-220ENST00000497506 CCDC88AQ3V6T2 1871 aa20.38■□□□□ 0.85
FAM3A-220ENST00000497506 LTBP3Q9NS15 1303 aa20.37■□□□□ 0.85
FAM3A-220ENST00000497506 MS4A1P11836 297 aa20.37■□□□□ 0.85
FAM3A-220ENST00000497506 ANKRD18AQ8IVF6 992 aa20.37■□□□□ 0.85
FAM3A-220ENST00000497506 RTKN2Q8IZC4 609 aa20.37■□□□□ 0.85
FAM3A-220ENST00000497506 GNAI3P08754 354 aa20.36■□□□□ 0.85
FAM3A-220ENST00000497506 GRIPAP1Q4V328 841 aa20.36■□□□□ 0.85
FAM3A-220ENST00000497506 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
FAM3A-220ENST00000497506 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
FAM3A-220ENST00000497506 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
FAM3A-220ENST00000497506 ITPRIPQ8IWB1 547 aa20.35■□□□□ 0.85
FAM3A-220ENST00000497506 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.35■□□□□ 0.85
FAM3A-220ENST00000497506 TAOK3Q9H2K8 898 aa20.35■□□□□ 0.85
FAM3A-220ENST00000497506 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
FAM3A-220ENST00000497506 LRRFIP2Q9Y608 721 aaKnown RBP20.35■□□□□ 0.85
FAM3A-220ENST00000497506 LTBP1Q14766 1721 aa20.34■□□□□ 0.85
FAM3A-220ENST00000497506 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
FAM3A-220ENST00000497506 PSMD1Q99460 953 aa20.34■□□□□ 0.85
FAM3A-220ENST00000497506 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
FAM3A-220ENST00000497506 BSDC1Q9NW68 430 aaPredicted RBP20.34■□□□□ 0.85
FAM3A-220ENST00000497506 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
FAM3A-220ENST00000497506 PDE3AQ14432 1141 aa20.33■□□□□ 0.85
FAM3A-220ENST00000497506 CCDC57Q2TAC2 916 aa20.33■□□□□ 0.85
FAM3A-220ENST00000497506 C20orf194Q5TEA3 1177 aa20.33■□□□□ 0.85
FAM3A-220ENST00000497506 MPNDQ8N594 471 aa20.33■□□□□ 0.85
FAM3A-220ENST00000497506 DUOX1Q9NRD9 1551 aa20.33■□□□□ 0.84
FAM3A-220ENST00000497506 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.84
FAM3A-220ENST00000497506 LMNB1P20700 586 aa20.32■□□□□ 0.84
FAM3A-220ENST00000497506 IGHMBP2P38935 993 aaKnown RBP20.32■□□□□ 0.84
FAM3A-220ENST00000497506 GPSM2P81274 684 aa20.32■□□□□ 0.84
FAM3A-220ENST00000497506 C9orf131Q5VYM1 1079 aa20.32■□□□□ 0.84
FAM3A-220ENST00000497506 ZNF594Q96JF6 807 aaPredicted RBP20.32■□□□□ 0.84
FAM3A-220ENST00000497506 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
FAM3A-220ENST00000497506 GNAI2P04899 355 aa20.31■□□□□ 0.84
FAM3A-220ENST00000497506 MVPQ14764 893 aaKnown RBP20.31■□□□□ 0.84
FAM3A-220ENST00000497506 DPP8Q6V1X1 898 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-220ENST00000497506 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
FAM3A-220ENST00000497506 COG6Q9Y2V7 657 aa20.31■□□□□ 0.84
FAM3A-220ENST00000497506 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
FAM3A-220ENST00000497506 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms