RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
HLA-B-254ENST00000497377 PRPF40BQ6NWY9 871 aaKnown RBP14.62□□□□□ -0.07
HLA-B-254ENST00000497377 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
HLA-B-254ENST00000497377 CWC25Q9NXE8 425 aaPredicted RBP14.62□□□□□ -0.07
HLA-B-254ENST00000497377 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 ALDH1L2Q3SY69 923 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 ZBTB38Q8NAP3 1195 aaPredicted RBP14.61□□□□□ -0.07
HLA-B-254ENST00000497377 DNAAF4Q8WXU2 420 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 CRAMP1Q96RY5 1269 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 FBXO3Q9UK99 471 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 SLX4Q8IY92 1834 aa14.61□□□□□ -0.07
HLA-B-254ENST00000497377 LAMB2P55268 1798 aa14.6□□□□□ -0.07
HLA-B-254ENST00000497377 PCCAP05165 728 aaPredicted RBP14.6□□□□□ -0.07
HLA-B-254ENST00000497377 KIF12Q96FN5 646 aa14.6□□□□□ -0.07
HLA-B-254ENST00000497377 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
HLA-B-254ENST00000497377 RBM17Q96I25 401 aaKnown RBP14.6□□□□□ -0.07
HLA-B-254ENST00000497377 DDX60Q8IY21 1712 aaKnown RBP14.59□□□□□ -0.07
HLA-B-254ENST00000497377 IGKV5-2P06315 115 aa14.59□□□□□ -0.07
HLA-B-254ENST00000497377 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
HLA-B-254ENST00000497377 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
HLA-B-254ENST00000497377 ZBED9Q6R2W3 1325 aa14.59□□□□□ -0.07
HLA-B-254ENST00000497377 NEURL1BA8MQ27 555 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.08
HLA-B-254ENST00000497377 C21orf2O43822 256 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 CC2D2BQ6DHV5 1058 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 SYNE4Q8N205 404 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 MRPL50Q8N5N7 158 aaKnown RBP14.58□□□□□ -0.08
HLA-B-254ENST00000497377 C7orf43Q8WVR3 580 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 FER1L6Q2WGJ9 1857 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 PTPRCP08575 1304 aa14.58□□□□□ -0.08
HLA-B-254ENST00000497377 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
HLA-B-254ENST00000497377 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
HLA-B-254ENST00000497377 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
HLA-B-254ENST00000497377 CDHR2Q9BYE9 1310 aa14.57□□□□□ -0.08
HLA-B-254ENST00000497377 LTBP3Q9NS15 1303 aa14.57□□□□□ -0.08
HLA-B-254ENST00000497377 SBF1O95248 1867 aa14.57□□□□□ -0.08
HLA-B-254ENST00000497377 BRPF1P55201 1214 aaPredicted RBP14.56□□□□□ -0.08
HLA-B-254ENST00000497377 CWF19L2Q2TBE0 894 aaKnown RBP14.56□□□□□ -0.08
HLA-B-254ENST00000497377 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
HLA-B-254ENST00000497377 DDX46Q7L014 1031 aaKnown RBP14.56□□□□□ -0.08
HLA-B-254ENST00000497377 RTKN2Q8IZC4 609 aa14.56□□□□□ -0.08
HLA-B-254ENST00000497377 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
HLA-B-254ENST00000497377 PDE8AO60658 829 aa14.55□□□□□ -0.08
HLA-B-254ENST00000497377 BBOX1O75936 387 aa14.55□□□□□ -0.08
HLA-B-254ENST00000497377 LMNB1P20700 586 aa14.55□□□□□ -0.08
HLA-B-254ENST00000497377 GCKRQ14397 625 aa14.55□□□□□ -0.08
HLA-B-254ENST00000497377 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
HLA-B-254ENST00000497377 TMC4Q7Z404 712 aa14.55□□□□□ -0.08
HLA-B-254ENST00000497377 TMX4Q9H1E5 349 aaPredicted RBP14.55□□□□□ -0.08
HLA-B-254ENST00000497377 F6X3S4 739 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 H7C1W4 665 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 NFKBIEO00221 500 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 PPEF1O14829 653 aaPredicted RBP14.54□□□□□ -0.08
HLA-B-254ENST00000497377 ALDH1L1O75891 902 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 GRAPQ13588 217 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 BEND3Q5T5X7 828 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 C9orf131Q5VYM1 1079 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 ASTLQ6HA08 431 aaPredicted RBP14.54□□□□□ -0.08
HLA-B-254ENST00000497377 GRAPLQ8TC17 118 aaPredicted RBP14.54□□□□□ -0.08
HLA-B-254ENST00000497377 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 ABCC4O15439 1325 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
HLA-B-254ENST00000497377 MYH3P11055 1940 aa14.54□□□□□ -0.08
HLA-B-254ENST00000497377 MAP3K13O43283 966 aa14.53□□□□□ -0.08
HLA-B-254ENST00000497377 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
HLA-B-254ENST00000497377 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
HLA-B-254ENST00000497377 RASSF7Q02833 373 aa14.53□□□□□ -0.08
HLA-B-254ENST00000497377 CCDC152Q4G0S7 254 aa14.53□□□□□ -0.08
HLA-B-254ENST00000497377 RNF181Q9P0P0 153 aa14.53□□□□□ -0.08
HLA-B-254ENST00000497377 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.08
HLA-B-254ENST00000497377 KIF16BQ96L93 1317 aa14.52□□□□□ -0.08
HLA-B-254ENST00000497377 NUBP1P53384 320 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 FKBP4Q02790 459 aaKnown RBP eCLIP14.52□□□□□ -0.09
HLA-B-254ENST00000497377 SLC4A10Q6U841 1118 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 ZNF784Q8NCA9 323 aaPredicted RBP14.52□□□□□ -0.09
HLA-B-254ENST00000497377 PLA2G12BQ9BX93 195 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 SRCIN1Q9C0H9 1055 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
HLA-B-254ENST00000497377 DICER1Q9UPY3 1922 aaKnown RBP14.52□□□□□ -0.09
HLA-B-254ENST00000497377 CTSWP56202 376 aa14.51□□□□□ -0.09
HLA-B-254ENST00000497377 SP8Q8IXZ3 490 aa14.51□□□□□ -0.09
HLA-B-254ENST00000497377 PSMD1Q99460 953 aa14.51□□□□□ -0.09
HLA-B-254ENST00000497377 SNED1Q8TER0 1413 aa14.5□□□□□ -0.09
HLA-B-254ENST00000497377 RTL9Q8NET4 1388 aa14.5□□□□□ -0.09
HLA-B-254ENST00000497377 GRM8O00222 908 aa14.5□□□□□ -0.09
HLA-B-254ENST00000497377 CASP7P55210 303 aa14.5□□□□□ -0.09
HLA-B-254ENST00000497377 JARID2Q92833 1246 aaPredicted RBP14.5□□□□□ -0.09
HLA-B-254ENST00000497377 API5Q9BZZ5 524 aaKnown RBP14.5□□□□□ -0.09
HLA-B-254ENST00000497377 TAF1P21675 1872 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 RPS8P62241 208 aaKnown RBP14.49□□□□□ -0.09
HLA-B-254ENST00000497377 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 ARHGAP45Q92619 1136 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 FAM212AQ96EL1 285 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 VPS33BQ9H267 617 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 C9orf78Q9NZ63 289 aaPredicted RBP14.49□□□□□ -0.09
HLA-B-254ENST00000497377 LRRC37AA6NMS7 1700 aa14.49□□□□□ -0.09
HLA-B-254ENST00000497377 TIAM2Q8IVF5 1701 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms