RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	C21orf2	O43822	256 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	GRIN3B	O60391	1043 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	PRELP	P51888	382 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	CTSW	P56202	376 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	RASSF7	Q02833	373 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	ATF7IP	Q6VMQ6	1270 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	C7orf43	Q8WVR3	580 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	ARHGAP45	Q92619	1136 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	PLA2G12B	Q9BX93	195 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	API5	Q9BZZ5	524 aa	Known RBP	10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	SEC31B	Q9NQW1	1179 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	DCAF8L1	A6NGE4	600 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	PPEF1	O14829	653 aa	Predicted RBP	10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	ALDH1B1	P30837	517 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	FOXO4	P98177	505 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	EPHA10	Q5JZY3	1008 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	CELF1	Q92879	486 aa	Known RBP	10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	RBM17	Q96I25	401 aa	Known RBP	10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	KAZALD1	Q96I82	304 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	RCAN3	Q9UKA8	241 aa		10.18	□□□□□ -0.78
EFNA1-205	ENST00000497282	RTL9	Q8NET4	1388 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	CCT4	P50991	539 aa	Known RBP	10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	GRAP	Q13588	217 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	ZKSCAN2	Q63HK3	967 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	ARHGAP27	Q6ZUM4	889 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	DDX46	Q7L014	1031 aa	Known RBP	10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	TTLL11	Q8NHH1	800 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	GRAPL	Q8TC17	118 aa	Predicted RBP	10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	CLUAP1	Q96AJ1	413 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	SUCLG2	Q96I99	432 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	USP44	Q9H0E7	712 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	GREM2	Q9H772	168 aa		10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	DICER1	Q9UPY3	1922 aa	Known RBP	10.17	□□□□□ -0.78
EFNA1-205	ENST00000497282	COL4A5	P29400	1685 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	IPO8	O15397	1037 aa	Known RBP	10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	CSF1R	P07333	972 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	RLBP1	P12271	317 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	FAM161A	Q3B820	660 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	CCDC152	Q4G0S7	254 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	CCDC93	Q567U6	631 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	INTS3	Q68E01	1043 aa	Known RBP	10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	TMEM57	Q8N5G2	664 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	MEIS3	Q99687	375 aa		10.16	□□□□□ -0.78
EFNA1-205	ENST00000497282	LTBP3	Q9NS15	1303 aa		10.15	□□□□□ -0.78
EFNA1-205	ENST00000497282	HSP90B1	P14625	803 aa	Known RBP	10.15	□□□□□ -0.78
EFNA1-205	ENST00000497282	BICC1	Q9H694	974 aa	Known RBP	10.15	□□□□□ -0.78
EFNA1-205	ENST00000497282	ATP6V0A2	Q9Y487	856 aa		10.15	□□□□□ -0.78
EFNA1-205	ENST00000497282	PLIN1	O60240	522 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	BBOX1	O75936	387 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	ITGA6	P23229	1130 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	SOGA3	Q5TF21	947 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	LMBR1L	Q6UX01	489 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	ANKRD44	Q8N8A2	993 aa		10.14	□□□□□ -0.79
EFNA1-205	ENST00000497282	RPS8	P62241	208 aa	Known RBP	10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	RABL6	Q3YEC7	729 aa	Predicted RBP	10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	SP8	Q8IXZ3	490 aa		10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	DZIP1L	Q8IYY4	767 aa	Known RBP	10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	PANK1	Q8TE04	598 aa		10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	TAOK3	Q9H2K8	898 aa		10.13	□□□□□ -0.79
EFNA1-205	ENST00000497282	GOLGB1	Q14789	3259 aa	Known RBP	10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	UBTFL1	P0CB47	393 aa	Predicted RBP	10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	C9orf131	Q5VYM1	1079 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	CC2D2B	Q6DHV5	1058 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	TMC4	Q7Z404	712 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	ANKRD18A	Q8IVF6	992 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	FTSJ3	Q8IY81	847 aa	Known RBP	10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	RTKN2	Q8IZC4	609 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	CDC5L	Q99459	802 aa	Known RBP	10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	RNF181	Q9P0P0	153 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	CHMP3	Q9Y3E7	222 aa		10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	LRRFIP2	Q9Y608	721 aa	Known RBP	10.12	□□□□□ -0.79
EFNA1-205	ENST00000497282	ANKRD18B	A2A2Z9	1011 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	LMNB1	P20700	586 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	YY1	P25490	414 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	GPSM2	P81274	684 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	IFIT5	Q13325	482 aa	Known RBP	10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	C20orf194	Q5TEA3	1177 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	ITPRIP	Q8IWB1	547 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	ZNF594	Q96JF6	807 aa	Predicted RBP	10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	PSMD1	Q99460	953 aa		10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.11	□□□□□ -0.79
EFNA1-205	ENST00000497282	ZNF646	O15015	1829 aa	Predicted RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	WTIP	A6NIX2	430 aa	Predicted RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	IARS	P41252	1262 aa	Known RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	MPND	Q8N594	471 aa		10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	GPR101	Q96P66	508 aa	Predicted RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	BSDC1	Q9NW68	430 aa	Predicted RBP	10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	UTRN	P46939	3433 aa		10.1	□□□□□ -0.79
EFNA1-205	ENST00000497282	ZBTB7B	O15156	539 aa	Predicted RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	GNAI3	P08754	354 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	IGHMBP2	P38935	993 aa	Known RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	RFX5	P48382	616 aa	Predicted RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	AOC3	Q16853	763 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	CCDC57	Q2TAC2	916 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	GRIPAP1	Q4V328	841 aa		10.09	□□□□□ -0.79

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