RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 GRAPQ13588 217 aa17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 MPNDQ8N594 471 aa17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
SPTAN1-209ENST00000497216 HSPA8P11142 646 aaKnown RBP17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 LBX1P52954 281 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 FMR1Q06787 632 aaKnown RBP eCLIP17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 CST9Q5W186 159 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 CIAPIN1Q6FI81 312 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 TLL2Q9Y6L7 1015 aa17.66■□□□□ 0.42
SPTAN1-209ENST00000497216 ECE1P42892 770 aa17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 KRT24Q2M2I5 525 aa17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 CAPNS2Q96L46 248 aa17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 CHPF2Q9P2E5 772 aa17.65■□□□□ 0.42
SPTAN1-209ENST00000497216 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 TRAF5O00463 557 aa17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 TNIP1Q15025 636 aa17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
SPTAN1-209ENST00000497216 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
SPTAN1-209ENST00000497216 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
SPTAN1-209ENST00000497216 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
SPTAN1-209ENST00000497216 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
SPTAN1-209ENST00000497216 COL4A1P02462 1669 aa17.63■□□□□ 0.41
SPTAN1-209ENST00000497216 SF3B3Q15393 1217 aaKnown RBP17.62■□□□□ 0.41
SPTAN1-209ENST00000497216 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
SPTAN1-209ENST00000497216 PSME4Q14997 1843 aa17.62■□□□□ 0.41
SPTAN1-209ENST00000497216 YDJCA8MPS7 323 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 RAD17O75943 681 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 MAP2K2P36507 400 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 GPR101Q96P66 508 aaPredicted RBP17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
SPTAN1-209ENST00000497216 SCN9AQ15858 1988 aa17.6■□□□□ 0.41
SPTAN1-209ENST00000497216 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
SPTAN1-209ENST00000497216 SAPCD2Q86UD0 394 aa17.6■□□□□ 0.41
SPTAN1-209ENST00000497216 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
SPTAN1-209ENST00000497216 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
SPTAN1-209ENST00000497216 CELF2O95319 508 aaKnown RBP17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 PAXIP1Q6ZW49 1069 aaPredicted RBP17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 DPF2Q92785 391 aa17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
SPTAN1-209ENST00000497216 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
SPTAN1-209ENST00000497216 WASHC4Q2M389 1173 aa17.58■□□□□ 0.4
SPTAN1-209ENST00000497216 CDC37L1Q7L3B6 337 aa17.58■□□□□ 0.4
SPTAN1-209ENST00000497216 TRPM4Q8TD43 1214 aa17.58■□□□□ 0.4
SPTAN1-209ENST00000497216 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.4
SPTAN1-209ENST00000497216 MYH3P11055 1940 aa17.57■□□□□ 0.4
SPTAN1-209ENST00000497216 ATP5J2-PTCD1G3V325 749 aa17.57■□□□□ 0.4
SPTAN1-209ENST00000497216 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
SPTAN1-209ENST00000497216 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
SPTAN1-209ENST00000497216 H7C1D1 291 aa17.56■□□□□ 0.4
SPTAN1-209ENST00000497216 MICALL2Q8IY33 904 aa17.56■□□□□ 0.4
SPTAN1-209ENST00000497216 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
SPTAN1-209ENST00000497216 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
SPTAN1-209ENST00000497216 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
SPTAN1-209ENST00000497216 CASP8AP2Q9UKL3 1982 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 PSMD14O00487 310 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 CA12O43570 354 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 AOC2O75106 756 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 RPS12P25398 132 aaKnown RBP17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 GRM1Q13255 1194 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 POLLQ9UGP5 575 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 ZNF609O15014 1411 aa17.55■□□□□ 0.4
SPTAN1-209ENST00000497216 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 BRPF1P55201 1214 aaPredicted RBP17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 RPS8P62241 208 aaKnown RBP17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 GPSM2P81274 684 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 EYA3Q99504 573 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
SPTAN1-209ENST00000497216 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
SPTAN1-209ENST00000497216 ECE2O60344 883 aa17.53■□□□□ 0.4
SPTAN1-209ENST00000497216 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
SPTAN1-209ENST00000497216 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
SPTAN1-209ENST00000497216 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
SPTAN1-209ENST00000497216 C6orf229H3BNL8 230 aa17.52■□□□□ 0.4
SPTAN1-209ENST00000497216 GNAI1P63096 354 aa17.52■□□□□ 0.4
SPTAN1-209ENST00000497216 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
SPTAN1-209ENST00000497216 GOLGA2Q08379 1002 aa17.52■□□□□ 0.4
SPTAN1-209ENST00000497216 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
SPTAN1-209ENST00000497216 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms