RNA–Protein interactions for RNA: ENST00000496827.1

SEC24C-205, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 3

Gene SEC24C, Length 948 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-205ENST00000496827 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
SEC24C-205ENST00000496827 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
SEC24C-205ENST00000496827 LAMB2P55268 1798 aa15.49■□□□□ 0.07
SEC24C-205ENST00000496827 CHD4Q14839 1912 aa15.49■□□□□ 0.07
SEC24C-205ENST00000496827 NFKBIEO00221 500 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 GRM8O00222 908 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 CTSWP56202 376 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 CCDC85AQ96PX6 553 aaPredicted RBP15.48■□□□□ 0.07
SEC24C-205ENST00000496827 PLA2G12BQ9BX93 195 aa15.48■□□□□ 0.07
SEC24C-205ENST00000496827 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
SEC24C-205ENST00000496827 C9orf131Q5VYM1 1079 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 SP8Q8IXZ3 490 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 TTLL11Q8NHH1 800 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 CELF1Q92879 486 aaKnown RBP15.47■□□□□ 0.07
SEC24C-205ENST00000496827 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
SEC24C-205ENST00000496827 LTBP3Q9NS15 1303 aa15.46■□□□□ 0.07
SEC24C-205ENST00000496827 LMNB1P20700 586 aa15.46■□□□□ 0.07
SEC24C-205ENST00000496827 RPS8P62241 208 aaKnown RBP15.46■□□□□ 0.07
SEC24C-205ENST00000496827 GRIPAP1Q4V328 841 aa15.46■□□□□ 0.07
SEC24C-205ENST00000496827 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
SEC24C-205ENST00000496827 RNF181Q9P0P0 153 aa15.46■□□□□ 0.07
SEC24C-205ENST00000496827 NBPF7P0C2Y1 421 aaPredicted RBP15.45■□□□□ 0.06
SEC24C-205ENST00000496827 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
SEC24C-205ENST00000496827 ZKSCAN2Q63HK3 967 aa15.45■□□□□ 0.06
SEC24C-205ENST00000496827 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
SEC24C-205ENST00000496827 CSF1RP07333 972 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 PRELPP51888 382 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 FOXO4P98177 505 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 CDC5LQ99459 802 aaKnown RBP15.44■□□□□ 0.06
SEC24C-205ENST00000496827 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 GREM2Q9H772 168 aa15.44■□□□□ 0.06
SEC24C-205ENST00000496827 UTYO14607 1347 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 TRIM27P14373 513 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 MPNDQ8N594 471 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 PSMD1Q99460 953 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 FER1L6Q2WGJ9 1857 aa15.43■□□□□ 0.06
SEC24C-205ENST00000496827 TAF1P21675 1872 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 ITGA6P23229 1130 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 INTS3Q68E01 1043 aaKnown RBP15.42■□□□□ 0.06
SEC24C-205ENST00000496827 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 SUCLG2Q96I99 432 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
SEC24C-205ENST00000496827 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
SEC24C-205ENST00000496827 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
SEC24C-205ENST00000496827 DPP8Q6V1X1 898 aaPredicted RBP15.41■□□□□ 0.06
SEC24C-205ENST00000496827 SUPT20HQ8NEM7 779 aa15.41■□□□□ 0.06
SEC24C-205ENST00000496827 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
SEC24C-205ENST00000496827 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
SEC24C-205ENST00000496827 NSFL1CQ9UNZ2 370 aaKnown RBP15.41■□□□□ 0.06
SEC24C-205ENST00000496827 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
SEC24C-205ENST00000496827 SBF1O95248 1867 aa15.4■□□□□ 0.06
SEC24C-205ENST00000496827 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
SEC24C-205ENST00000496827 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
SEC24C-205ENST00000496827 IFIT5Q13325 482 aaKnown RBP15.4■□□□□ 0.06
SEC24C-205ENST00000496827 ZNF784Q8NCA9 323 aaPredicted RBP15.4■□□□□ 0.06
SEC24C-205ENST00000496827 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
SEC24C-205ENST00000496827 MYH3P11055 1940 aa15.4■□□□□ 0.06
SEC24C-205ENST00000496827 COL4A1P02462 1669 aa15.39■□□□□ 0.05
SEC24C-205ENST00000496827 UBTFL1P0CB47 393 aaPredicted RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 GPSM2P81274 684 aa15.39■□□□□ 0.05
SEC24C-205ENST00000496827 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
SEC24C-205ENST00000496827 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
SEC24C-205ENST00000496827 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 BSDC1Q9NW68 430 aaPredicted RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
SEC24C-205ENST00000496827 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
SEC24C-205ENST00000496827 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
SEC24C-205ENST00000496827 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
SEC24C-205ENST00000496827 ANKIB1Q9P2G1 1089 aa15.38■□□□□ 0.05
SEC24C-205ENST00000496827 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 GNAI3P08754 354 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
SEC24C-205ENST00000496827 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 ZNF526Q8TF50 670 aaPredicted RBP15.37■□□□□ 0.05
SEC24C-205ENST00000496827 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 MEIS3Q99687 375 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
SEC24C-205ENST00000496827 PPIP5K2O43314 1243 aa15.36■□□□□ 0.05
SEC24C-205ENST00000496827 MS4A1P11836 297 aa15.36■□□□□ 0.05
SEC24C-205ENST00000496827 AOC3Q16853 763 aa15.36■□□□□ 0.05
SEC24C-205ENST00000496827 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
SEC24C-205ENST00000496827 ZNF594Q96JF6 807 aaPredicted RBP15.36■□□□□ 0.05
SEC24C-205ENST00000496827 GPBP1L1Q9HC44 474 aaPredicted RBP15.36■□□□□ 0.05
SEC24C-205ENST00000496827 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
SEC24C-205ENST00000496827 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms