RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 DICER1Q9UPY3 1922 aaKnown RBP9.63□□□□□ -0.87
CDHR3-214ENST00000496633 GLTPD2A6NH11 291 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 HCLS1P14317 486 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-214ENST00000496633 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
CDHR3-214ENST00000496633 MIER1Q8N108 512 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 CACNA1SQ13698 1873 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
CDHR3-214ENST00000496633 ABCC4O15439 1325 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 IQCA1LA6NCM1 817 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 RPS8P62241 208 aaKnown RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 GCKRQ14397 625 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 MPNDQ8N594 471 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 EYA3Q99504 573 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 PLA2G12BQ9BX93 195 aa9.62□□□□□ -0.87
CDHR3-214ENST00000496633 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-214ENST00000496633 TNRC6CQ9HCJ0 1690 aaKnown RBP9.61□□□□□ -0.87
CDHR3-214ENST00000496633 KIF16BQ96L93 1317 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 H7C1W4 665 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
CDHR3-214ENST00000496633 TOMM70O94826 608 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 IGKV5-2P06315 115 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 CTSWP56202 376 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 EIF6P56537 245 aaKnown RBP9.61□□□□□ -0.87
CDHR3-214ENST00000496633 RASSF7Q02833 373 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 ANKRD18AQ8IVF6 992 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 RTFDC1Q9BY42 306 aaPredicted RBP9.61□□□□□ -0.87
CDHR3-214ENST00000496633 SRCIN1Q9C0H9 1055 aa9.61□□□□□ -0.87
CDHR3-214ENST00000496633 C9orf78Q9NZ63 289 aaPredicted RBP9.61□□□□□ -0.87
CDHR3-214ENST00000496633 DDX60Q8IY21 1712 aaKnown RBP9.6□□□□□ -0.87
CDHR3-214ENST00000496633 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 TCERG1O14776 1098 aaKnown RBP9.6□□□□□ -0.87
CDHR3-214ENST00000496633 IGHMBP2P38935 993 aaKnown RBP9.6□□□□□ -0.87
CDHR3-214ENST00000496633 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDHR3-214ENST00000496633 G2E3Q7L622 706 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 NIM1KQ8IY84 436 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 LARGE2Q8N3Y3 721 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 ARHGAP45Q92619 1136 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
CDHR3-214ENST00000496633 SMC4Q9NTJ3 1288 aa9.6□□□□□ -0.87
CDHR3-214ENST00000496633 CCDC88AQ3V6T2 1871 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 TIAM2Q8IVF5 1701 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 MYH3P11055 1940 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 GRM8O00222 908 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 CCT4P50991 539 aaKnown RBP9.59□□□□□ -0.87
CDHR3-214ENST00000496633 C1QTNF8P60827 252 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 FSTL1Q12841 308 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 TNIP1Q15025 636 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 CWF19L2Q2TBE0 894 aaKnown RBP9.59□□□□□ -0.87
CDHR3-214ENST00000496633 BEND3Q5T5X7 828 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 UBE3BQ7Z3V4 1068 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 GPC2Q8N158 579 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 MRPL50Q8N5N7 158 aaKnown RBP9.59□□□□□ -0.87
CDHR3-214ENST00000496633 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
CDHR3-214ENST00000496633 ZNF526Q8TF50 670 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-214ENST00000496633 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
CDHR3-214ENST00000496633 ANKRD18BA2A2Z9 1011 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 G3V3G9 751 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 FZD9O00144 591 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 PPIP5K2O43314 1243 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 KIAA2012Q0VF49 1180 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 PNMA8AQ86V59 439 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 TTLL11Q8NHH1 800 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 ZC3H12CQ9C0D7 883 aaKnown RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 ANKRD2Q9GZV1 360 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 BSDC1Q9NW68 430 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
CDHR3-214ENST00000496633 NSFL1CQ9UNZ2 370 aaKnown RBP9.58□□□□□ -0.88
CDHR3-214ENST00000496633 XDHP47989 1333 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 SNED1Q8TER0 1413 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 LRRC37AA6NMS7 1700 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 CSF1RP07333 972 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 ATP2B4P23634 1241 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
CDHR3-214ENST00000496633 MMP14P50281 582 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 IFIT5Q13325 482 aaKnown RBP9.57□□□□□ -0.88
CDHR3-214ENST00000496633 WASHC4Q2M389 1173 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 CCDC57Q2TAC2 916 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 SSH1Q8WYL5 1049 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 CDCA7LQ96GN5 454 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
CDHR3-214ENST00000496633 GGA1Q9UJY5 639 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 ZNRF3Q9ULT6 936 aa9.57□□□□□ -0.88
CDHR3-214ENST00000496633 WDR90Q96KV7 1748 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms