RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 VEGFAP15692 232 aaPredicted RBP18.52■□□□□ 0.56
PDAP1-204ENST00000496335 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
PDAP1-204ENST00000496335 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
PDAP1-204ENST00000496335 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
PDAP1-204ENST00000496335 C16orf71Q8IYS4 520 aaPredicted RBP18.52■□□□□ 0.56
PDAP1-204ENST00000496335 CELF1Q92879 486 aaKnown RBP18.52■□□□□ 0.56
PDAP1-204ENST00000496335 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
PDAP1-204ENST00000496335 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 COL4A5P29400 1685 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 NEURL1BA8MQ27 555 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 MIER1Q8N108 512 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 CDCA7LQ96GN5 454 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
PDAP1-204ENST00000496335 PDE8AO60658 829 aa18.5■□□□□ 0.55
PDAP1-204ENST00000496335 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
PDAP1-204ENST00000496335 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
PDAP1-204ENST00000496335 E9PSI1 815 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 F6X3S4 739 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 FZD9O00144 591 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 HSP90B1P14625 803 aaKnown RBP18.49■□□□□ 0.55
PDAP1-204ENST00000496335 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 DPP8Q6V1X1 898 aaPredicted RBP18.49■□□□□ 0.55
PDAP1-204ENST00000496335 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 MPNDQ8N594 471 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
PDAP1-204ENST00000496335 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
PDAP1-204ENST00000496335 GCKRQ14397 625 aa18.48■□□□□ 0.55
PDAP1-204ENST00000496335 AOC3Q16853 763 aa18.48■□□□□ 0.55
PDAP1-204ENST00000496335 LRRC37AA6NMS7 1700 aa18.48■□□□□ 0.55
PDAP1-204ENST00000496335 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
PDAP1-204ENST00000496335 MYH3P11055 1940 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 H7C1W4 665 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 PPIP5K2O43314 1243 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 HSPA6P17066 643 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 RPS8P62241 208 aaKnown RBP18.47■□□□□ 0.55
PDAP1-204ENST00000496335 CCDC152Q4G0S7 254 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 TMC4Q7Z404 712 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 RTFDC1Q9BY42 306 aaPredicted RBP18.47■□□□□ 0.55
PDAP1-204ENST00000496335 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
PDAP1-204ENST00000496335 CTSWP56202 376 aa18.45■□□□□ 0.54
PDAP1-204ENST00000496335 NIM1KQ8IY84 436 aa18.45■□□□□ 0.54
PDAP1-204ENST00000496335 SUPT20HQ8NEM7 779 aa18.45■□□□□ 0.54
PDAP1-204ENST00000496335 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
PDAP1-204ENST00000496335 DUOX1Q9NRD9 1551 aa18.44■□□□□ 0.54
PDAP1-204ENST00000496335 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
PDAP1-204ENST00000496335 GPSM2P81274 684 aa18.44■□□□□ 0.54
PDAP1-204ENST00000496335 BEND3Q5T5X7 828 aa18.44■□□□□ 0.54
PDAP1-204ENST00000496335 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
PDAP1-204ENST00000496335 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
PDAP1-204ENST00000496335 CASP7P55210 303 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 FSTL1Q12841 308 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
PDAP1-204ENST00000496335 GPC2Q8N158 579 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 MRPL50Q8N5N7 158 aaKnown RBP18.43■□□□□ 0.54
PDAP1-204ENST00000496335 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 GJA3Q9Y6H8 435 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 SCN4AP35499 1836 aa18.43■□□□□ 0.54
PDAP1-204ENST00000496335 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 KIAA2012Q0VF49 1180 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 SMC1BQ8NDV3 1235 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 GREM2Q9H772 168 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 POLLQ9UGP5 575 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
PDAP1-204ENST00000496335 LTBP1Q14766 1721 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 IQCA1LA6NCM1 817 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 ANKRD18AQ8IVF6 992 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 GPR101Q96P66 508 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-204ENST00000496335 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-204ENST00000496335 ZNRF3Q9ULT6 936 aa18.41■□□□□ 0.54
PDAP1-204ENST00000496335 RIMBP2O15034 1052 aa18.4■□□□□ 0.54
PDAP1-204ENST00000496335 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
PDAP1-204ENST00000496335 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
PDAP1-204ENST00000496335 CXCL9Q07325 125 aa18.39■□□□□ 0.53
PDAP1-204ENST00000496335 WASHC4Q2M389 1173 aa18.39■□□□□ 0.53
PDAP1-204ENST00000496335 TBC1D16Q8TBP0 767 aa18.39■□□□□ 0.53
PDAP1-204ENST00000496335 ANKIB1Q9P2G1 1089 aa18.39■□□□□ 0.53
PDAP1-204ENST00000496335 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
PDAP1-204ENST00000496335 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 RAD17O75943 681 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 CSF1RP07333 972 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 EPHX2P34913 555 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 APLP1P51693 650 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
PDAP1-204ENST00000496335 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 PODXL2Q9NZ53 605 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
PDAP1-204ENST00000496335 GRM8O00222 908 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 UFL1O94874 794 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 ITGA6P23229 1130 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 EPS15P42566 896 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms