RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
RN7SL564P-201ENST00000496309 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
RN7SL564P-201ENST00000496309 CTSWP56202 376 aa17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 GRAPQ13588 217 aa17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 GRAPLQ8TC17 118 aaPredicted RBP17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 SNED1Q8TER0 1413 aa17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 SBF1O95248 1867 aa17.63■□□□□ 0.41
RN7SL564P-201ENST00000496309 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 GRM8O00222 908 aa17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 PRELPP51888 382 aa17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 FRAT1Q92837 279 aaPredicted RBP17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
RN7SL564P-201ENST00000496309 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
RN7SL564P-201ENST00000496309 TAOK3Q9H2K8 898 aa17.61■□□□□ 0.41
RN7SL564P-201ENST00000496309 SEC31BQ9NQW1 1179 aa17.61■□□□□ 0.41
RN7SL564P-201ENST00000496309 C9orf78Q9NZ63 289 aaPredicted RBP17.61■□□□□ 0.41
RN7SL564P-201ENST00000496309 BBOX1O75936 387 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 C9orf131Q5VYM1 1079 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 RNF181Q9P0P0 153 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 SPEF2Q9C093 1822 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
RN7SL564P-201ENST00000496309 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
RN7SL564P-201ENST00000496309 NBPF7P0C2Y1 421 aaPredicted RBP17.59■□□□□ 0.41
RN7SL564P-201ENST00000496309 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
RN7SL564P-201ENST00000496309 GREM2Q9H772 168 aa17.59■□□□□ 0.41
RN7SL564P-201ENST00000496309 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
RN7SL564P-201ENST00000496309 UTYO14607 1347 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 TRIM27P14373 513 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 LMNB1P20700 586 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 FOXO4P98177 505 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 FKBP4Q02790 459 aaKnown RBP eCLIP17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
RN7SL564P-201ENST00000496309 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 TMX4Q9H1E5 349 aaPredicted RBP17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
RN7SL564P-201ENST00000496309 CSF1RP07333 972 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 RPS8P62241 208 aaKnown RBP17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 TMC4Q7Z404 712 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 USP44Q9H0E7 712 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 DUOX1Q9NRD9 1551 aa17.56■□□□□ 0.4
RN7SL564P-201ENST00000496309 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 DICER1Q9UPY3 1922 aaKnown RBP17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 ITGA6P23229 1130 aa17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 KAZALD1Q96I82 304 aa17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 PSMD1Q99460 953 aa17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
RN7SL564P-201ENST00000496309 GRIPAP1Q4V328 841 aa17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 ZNF784Q8NCA9 323 aaPredicted RBP17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 CDC5LQ99459 802 aaKnown RBP17.54■□□□□ 0.4
RN7SL564P-201ENST00000496309 COL4A5P29400 1685 aa17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 MPNDQ8N594 471 aa17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 RCAN3Q9UKA8 241 aa17.53■□□□□ 0.4
RN7SL564P-201ENST00000496309 IARSP41252 1262 aaKnown RBP17.52■□□□□ 0.4
RN7SL564P-201ENST00000496309 GPSM2P81274 684 aa17.52■□□□□ 0.4
RN7SL564P-201ENST00000496309 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
RN7SL564P-201ENST00000496309 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
RN7SL564P-201ENST00000496309 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
RN7SL564P-201ENST00000496309 MEIS3Q99687 375 aa17.51■□□□□ 0.39
RN7SL564P-201ENST00000496309 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
RN7SL564P-201ENST00000496309 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 UBTFL1P0CB47 393 aaPredicted RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 FTSJ3Q8IY81 847 aaKnown RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
RN7SL564P-201ENST00000496309 A0A1B0GUL6 1792 aa17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 RLBP1P12271 317 aa17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 AOC3Q16853 763 aa17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 BSDC1Q9NW68 430 aaPredicted RBP17.49■□□□□ 0.39
RN7SL564P-201ENST00000496309 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
RN7SL564P-201ENST00000496309 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
RN7SL564P-201ENST00000496309 LARGE2Q8N3Y3 721 aa17.48■□□□□ 0.39
RN7SL564P-201ENST00000496309 MPHOSPH8Q99549 860 aa17.48■□□□□ 0.39
RN7SL564P-201ENST00000496309 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms