RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 VRTNQ9H8Y1 702 aa9.9□□□□□ -0.82
CLTC-208ENST00000496076 FRRS1LQ9P0K9 344 aa9.9□□□□□ -0.82
CLTC-208ENST00000496076 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L15C9J2P7 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L10C9JJH3 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L13C9JLJ4 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L12C9JPN9 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L11C9JVI0 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L21D6R901 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L18D6R9N7 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L22D6RA61 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L17D6RBQ6 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L19D6RCP7 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L20D6RJB6 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 SASH3O75995 380 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 ARSDP51689 593 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 MLLT1Q03111 559 aaPredicted RBP9.89□□□□□ -0.83
CLTC-208ENST00000496076 PLAURQ03405 335 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 USP17L24Q0WX57 530 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 ELMSAN1Q6PJG2 1045 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 FBXO11Q86XK2 927 aa9.89□□□□□ -0.83
CLTC-208ENST00000496076 MICAL2O94851 1124 aa9.88□□□□□ -0.83
CLTC-208ENST00000496076 WFDC8Q8IUA0 241 aa9.88□□□□□ -0.83
CLTC-208ENST00000496076 WFDC12Q8WWY7 111 aa9.88□□□□□ -0.83
CLTC-208ENST00000496076 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
CLTC-208ENST00000496076 C11orf16Q9NQ32 467 aa9.88□□□□□ -0.83
CLTC-208ENST00000496076 RARAP10276 462 aa9.87□□□□□ -0.83
CLTC-208ENST00000496076 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
CLTC-208ENST00000496076 C11orf91Q3C1V1 193 aa9.87□□□□□ -0.83
CLTC-208ENST00000496076 TTC9Q92623 222 aa9.87□□□□□ -0.83
CLTC-208ENST00000496076 WEE1P30291 646 aa9.86□□□□□ -0.83
CLTC-208ENST00000496076 IREB2P48200 963 aaKnown RBP9.86□□□□□ -0.83
CLTC-208ENST00000496076 LRP8Q14114 963 aa9.86□□□□□ -0.83
CLTC-208ENST00000496076 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
CLTC-208ENST00000496076 FOXO3O43524 673 aa9.85□□□□□ -0.83
CLTC-208ENST00000496076 GPLD1P80108 840 aa9.85□□□□□ -0.83
CLTC-208ENST00000496076 IGF2-ASQ6U949 168 aa9.85□□□□□ -0.83
CLTC-208ENST00000496076 HFE2Q6ZVN8 426 aa9.85□□□□□ -0.83
CLTC-208ENST00000496076 ARXQ96QS3 562 aa9.85□□□□□ -0.83
CLTC-208ENST00000496076 KRTAP9-6A0A140TA67 174 aa9.84□□□□□ -0.83
CLTC-208ENST00000496076 OPLAHO14841 1288 aa9.84□□□□□ -0.83
CLTC-208ENST00000496076 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
CLTC-208ENST00000496076 NOS3P29474 1203 aa9.84□□□□□ -0.83
CLTC-208ENST00000496076 MYO19Q96H55 970 aa9.84□□□□□ -0.83
CLTC-208ENST00000496076 SMG9Q9H0W8 520 aaKnown RBP9.84□□□□□ -0.83
CLTC-208ENST00000496076 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
CLTC-208ENST00000496076 ARID4AP29374 1257 aaPredicted RBP9.83□□□□□ -0.84
CLTC-208ENST00000496076 RTCBQ9Y3I0 505 aaKnown RBP9.83□□□□□ -0.84
CLTC-208ENST00000496076 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
CLTC-208ENST00000496076 NRLP54845 237 aa9.82□□□□□ -0.84
CLTC-208ENST00000496076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.849e-6■■□□□ 13.5
CLTC-208ENST00000496076 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
CLTC-208ENST00000496076 LRFN2Q9ULH4 789 aa9.81□□□□□ -0.84
CLTC-208ENST00000496076 EGFRP00533 1210 aa9.8□□□□□ -0.84
CLTC-208ENST00000496076 EIF2AK2P19525 551 aaKnown RBP9.8□□□□□ -0.84
CLTC-208ENST00000496076 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
CLTC-208ENST00000496076 FAM200AQ8TCP9 573 aa9.8□□□□□ -0.84
CLTC-208ENST00000496076 MEGF10Q96KG7 1140 aa9.8□□□□□ -0.84
CLTC-208ENST00000496076 A6NJR5 290 aa9.79□□□□□ -0.84
CLTC-208ENST00000496076 J3QW42 95 aa9.79□□□□□ -0.84
CLTC-208ENST00000496076 XYLBO75191 536 aa9.79□□□□□ -0.84
CLTC-208ENST00000496076 RGL4Q8IZJ4 473 aa9.79□□□□□ -0.84
CLTC-208ENST00000496076 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
CLTC-208ENST00000496076 DLL1O00548 723 aa9.78□□□□□ -0.84
CLTC-208ENST00000496076 SIK1P57059 783 aa9.78□□□□□ -0.84
CLTC-208ENST00000496076 TREML1Q86YW5 311 aa9.78□□□□□ -0.84
CLTC-208ENST00000496076 PLD4Q96BZ4 506 aa9.78□□□□□ -0.84
CLTC-208ENST00000496076 PSAPP07602 524 aa9.77□□□□□ -0.85
CLTC-208ENST00000496076 MMP20O60882 483 aa9.76□□□□□ -0.85
CLTC-208ENST00000496076 CDCA8Q53HL2 280 aa9.76□□□□□ -0.85
CLTC-208ENST00000496076 GDF6Q6KF10 455 aaPredicted RBP9.76□□□□□ -0.85
CLTC-208ENST00000496076 PRR23CQ6ZRP0 262 aa9.76□□□□□ -0.85
CLTC-208ENST00000496076 AKTIPQ9H8T0 292 aa9.76□□□□□ -0.85
CLTC-208ENST00000496076 RNF112Q9ULX5 631 aa9.76□□□□□ -0.85
CLTC-208ENST00000496076 RFX1P22670 979 aa9.75□□□□□ -0.85
CLTC-208ENST00000496076 COX20Q5RI15 118 aa9.75□□□□□ -0.85
CLTC-208ENST00000496076 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
CLTC-208ENST00000496076 IL22RA1Q8N6P7 574 aa9.75□□□□□ -0.85
CLTC-208ENST00000496076 KCNMB2Q9Y691 235 aa9.75□□□□□ -0.85
CLTC-208ENST00000496076 ALX3O95076 343 aa9.74□□□□□ -0.85
CLTC-208ENST00000496076 GHRHP01286 108 aa9.74□□□□□ -0.85
CLTC-208ENST00000496076 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
CLTC-208ENST00000496076 TMEM130Q8N3G9 435 aa9.74□□□□□ -0.85
CLTC-208ENST00000496076 NSUN5Q96P11 429 aaKnown RBP9.74□□□□□ -0.85
CLTC-208ENST00000496076 FKBP5Q13451 457 aaPredicted RBP9.73□□□□□ -0.85
CLTC-208ENST00000496076 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
CLTC-208ENST00000496076 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
CLTC-208ENST00000496076 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
CLTC-208ENST00000496076 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
CLTC-208ENST00000496076 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
CLTC-208ENST00000496076 SOX18P35713 384 aa9.71□□□□□ -0.86
CLTC-208ENST00000496076 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.86
CLTC-208ENST00000496076 HOXD8P13378 290 aaPredicted RBP9.7□□□□□ -0.86
CLTC-208ENST00000496076 SETDB1Q15047 1291 aa9.7□□□□□ -0.86
CLTC-208ENST00000496076 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
CLTC-208ENST00000496076 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
CLTC-208ENST00000496076 TRIM33Q9UPN9 1127 aa9.7□□□□□ -0.86
CLTC-208ENST00000496076 SLC51AQ86UW1 340 aa9.69□□□□□ -0.86
CLTC-208ENST00000496076 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms