RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 WDR90Q96KV7 1748 aa22.17■■□□□ 1.14
CTNS-207ENST00000495445 DDNO94850 711 aaPredicted RBP22.16■■□□□ 1.14
CTNS-207ENST00000495445 VPS33BQ9H267 617 aa22.16■■□□□ 1.14
CTNS-207ENST00000495445 HSP90B1P14625 803 aaKnown RBP22.15■■□□□ 1.14
CTNS-207ENST00000495445 HSPA6P17066 643 aa22.15■■□□□ 1.14
CTNS-207ENST00000495445 TMC4Q7Z404 712 aa22.15■■□□□ 1.14
CTNS-207ENST00000495445 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
CTNS-207ENST00000495445 TAF1P21675 1872 aa22.13■■□□□ 1.13
CTNS-207ENST00000495445 CDHR2Q9BYE9 1310 aa22.13■■□□□ 1.13
CTNS-207ENST00000495445 NEURL1BA8MQ27 555 aa22.13■■□□□ 1.13
CTNS-207ENST00000495445 PDE8AO60658 829 aa22.13■■□□□ 1.13
CTNS-207ENST00000495445 FSTL1Q12841 308 aa22.13■■□□□ 1.13
CTNS-207ENST00000495445 CELF1Q92879 486 aaKnown RBP22.13■■□□□ 1.13
CTNS-207ENST00000495445 L3MBTL3Q96JM7 780 aaPredicted RBP22.13■■□□□ 1.13
CTNS-207ENST00000495445 TMX4Q9H1E5 349 aaPredicted RBP22.13■■□□□ 1.13
CTNS-207ENST00000495445 COL4A5P29400 1685 aa22.12■■□□□ 1.13
CTNS-207ENST00000495445 NEXNQ0ZGT2 675 aa22.12■■□□□ 1.13
CTNS-207ENST00000495445 JARID2Q92833 1246 aaPredicted RBP22.12■■□□□ 1.13
CTNS-207ENST00000495445 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
CTNS-207ENST00000495445 H7C1W4 665 aa22.11■■□□□ 1.13
CTNS-207ENST00000495445 RPS8P62241 208 aaKnown RBP22.11■■□□□ 1.13
CTNS-207ENST00000495445 CWF19L2Q2TBE0 894 aaKnown RBP22.11■■□□□ 1.13
CTNS-207ENST00000495445 MPNDQ8N594 471 aa22.11■■□□□ 1.13
CTNS-207ENST00000495445 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
CTNS-207ENST00000495445 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
CTNS-207ENST00000495445 E9PSI1 815 aa22.1■■□□□ 1.13
CTNS-207ENST00000495445 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
CTNS-207ENST00000495445 FKBP5Q13451 457 aaPredicted RBP22.1■■□□□ 1.13
CTNS-207ENST00000495445 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
CTNS-207ENST00000495445 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
CTNS-207ENST00000495445 TRMT2AQ8IZ69 625 aaKnown RBP22.09■■□□□ 1.13
CTNS-207ENST00000495445 LARGE2Q8N3Y3 721 aa22.09■■□□□ 1.13
CTNS-207ENST00000495445 SEC31BQ9NQW1 1179 aa22.09■■□□□ 1.13
CTNS-207ENST00000495445 COL4A1P02462 1669 aa22.09■■□□□ 1.13
CTNS-207ENST00000495445 CASP7P55210 303 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 GCKRQ14397 625 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 CCDC152Q4G0S7 254 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 GPC2Q8N158 579 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 SMC1BQ8NDV3 1235 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 LINS1Q8NG48 757 aa22.08■■□□□ 1.13
CTNS-207ENST00000495445 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 PPIP5K2O43314 1243 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 KIAA2012Q0VF49 1180 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 AOC3Q16853 763 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 TTLL11Q8NHH1 800 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 PLA2G12BQ9BX93 195 aa22.06■■□□□ 1.12
CTNS-207ENST00000495445 IQCA1LA6NCM1 817 aa22.05■■□□□ 1.12
CTNS-207ENST00000495445 EIF6P56537 245 aaKnown RBP22.05■■□□□ 1.12
CTNS-207ENST00000495445 BEND3Q5T5X7 828 aa22.05■■□□□ 1.12
CTNS-207ENST00000495445 SCN4AP35499 1836 aa22.05■■□□□ 1.12
CTNS-207ENST00000495445 F6X3S4 739 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 APLP1P51693 650 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 CTSWP56202 376 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 NIM1KQ8IY84 436 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 CDCA7LQ96GN5 454 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 TAF1DQ9H5J8 278 aaPredicted RBP22.04■■□□□ 1.12
CTNS-207ENST00000495445 PODXL2Q9NZ53 605 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 ZNRF3Q9ULT6 936 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 DUOX1Q9NRD9 1551 aa22.04■■□□□ 1.12
CTNS-207ENST00000495445 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
CTNS-207ENST00000495445 GPSM2P81274 684 aa22.03■■□□□ 1.12
CTNS-207ENST00000495445 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
CTNS-207ENST00000495445 POLLQ9UGP5 575 aa22.03■■□□□ 1.12
CTNS-207ENST00000495445 NSFL1CQ9UNZ2 370 aaKnown RBP22.03■■□□□ 1.12
CTNS-207ENST00000495445 CSF1RP07333 972 aa22.02■■□□□ 1.12
CTNS-207ENST00000495445 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
CTNS-207ENST00000495445 HACL1Q9UJ83 578 aa22.02■■□□□ 1.12
CTNS-207ENST00000495445 POTEIP0CG38 1075 aa22.01■■□□□ 1.11
CTNS-207ENST00000495445 POTEJP0CG39 1038 aa22.01■■□□□ 1.11
CTNS-207ENST00000495445 CXCL9Q07325 125 aa22.01■■□□□ 1.11
CTNS-207ENST00000495445 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
CTNS-207ENST00000495445 CCDC85AQ96PX6 553 aaPredicted RBP22.01■■□□□ 1.11
CTNS-207ENST00000495445 GREM2Q9H772 168 aa22.01■■□□□ 1.11
CTNS-207ENST00000495445 MIER1Q8N108 512 aa22■■□□□ 1.11
CTNS-207ENST00000495445 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
CTNS-207ENST00000495445 TBC1D16Q8TBP0 767 aa22■■□□□ 1.11
CTNS-207ENST00000495445 LTBP1Q14766 1721 aa22■■□□□ 1.11
CTNS-207ENST00000495445 EPHX2P34913 555 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 SCNN1DP51172 638 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 WASHC4Q2M389 1173 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 CHADLQ6NUI6 762 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 ANKRD18AQ8IVF6 992 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 GJA3Q9Y6H8 435 aa21.99■■□□□ 1.11
CTNS-207ENST00000495445 YDJCA8MPS7 323 aa21.98■■□□□ 1.11
CTNS-207ENST00000495445 LDHDQ86WU2 507 aa21.98■■□□□ 1.11
CTNS-207ENST00000495445 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
CTNS-207ENST00000495445 CDC5LQ99459 802 aaKnown RBP21.98■■□□□ 1.11
CTNS-207ENST00000495445 BSDC1Q9NW68 430 aaPredicted RBP21.98■■□□□ 1.11
CTNS-207ENST00000495445 MYH3P11055 1940 aa21.98■■□□□ 1.11
CTNS-207ENST00000495445 C6orf229H3BNL8 230 aa21.97■■□□□ 1.11
CTNS-207ENST00000495445 ALDH1L1O75891 902 aa21.97■■□□□ 1.11
CTNS-207ENST00000495445 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
CTNS-207ENST00000495445 FOXO4P98177 505 aa21.96■■□□□ 1.11
CTNS-207ENST00000495445 ALDH1L2Q3SY69 923 aa21.96■■□□□ 1.11
CTNS-207ENST00000495445 EYA3Q99504 573 aa21.96■■□□□ 1.11
CTNS-207ENST00000495445 MINPP1Q9UNW1 487 aa21.96■■□□□ 1.11
CTNS-207ENST00000495445 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
CTNS-207ENST00000495445 EPS15P42566 896 aa21.95■■□□□ 1.1
CTNS-207ENST00000495445 CIAPIN1Q6FI81 312 aa21.95■■□□□ 1.1
CTNS-207ENST00000495445 ANKIB1Q9P2G1 1089 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms