RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-232ENST00000495434 POTECB2RU33 542 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
MRPL55-232ENST00000495434 FLIIQ13045 1269 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 G2E3Q7L622 706 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
MRPL55-232ENST00000495434 PDE8AO60658 829 aa17.95■□□□□ 0.46
MRPL55-232ENST00000495434 DDNO94850 711 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-232ENST00000495434 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
MRPL55-232ENST00000495434 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-232ENST00000495434 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-232ENST00000495434 CDHR2Q9BYE9 1310 aa17.95■□□□□ 0.46
MRPL55-232ENST00000495434 TAF1P21675 1872 aa17.95■□□□□ 0.46
MRPL55-232ENST00000495434 SCN4AP35499 1836 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 LRRC37AA6NMS7 1700 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-232ENST00000495434 DPP8Q6V1X1 898 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-232ENST00000495434 MPNDQ8N594 471 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 SMC1BQ8NDV3 1235 aa17.93■□□□□ 0.46
MRPL55-232ENST00000495434 E9PSI1 815 aa17.92■□□□□ 0.46
MRPL55-232ENST00000495434 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
MRPL55-232ENST00000495434 LARGE2Q8N3Y3 721 aa17.92■□□□□ 0.46
MRPL55-232ENST00000495434 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
MRPL55-232ENST00000495434 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
MRPL55-232ENST00000495434 APLP1P51693 650 aa17.91■□□□□ 0.46
MRPL55-232ENST00000495434 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
MRPL55-232ENST00000495434 RPS8P62241 208 aaKnown RBP17.91■□□□□ 0.46
MRPL55-232ENST00000495434 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
MRPL55-232ENST00000495434 GPC2Q8N158 579 aa17.91■□□□□ 0.46
MRPL55-232ENST00000495434 CELF1Q92879 486 aaKnown RBP17.91■□□□□ 0.46
MRPL55-232ENST00000495434 COL4A5P29400 1685 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 H7C1W4 665 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 PPIP5K2O43314 1243 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 CWF19L2Q2TBE0 894 aaKnown RBP17.9■□□□□ 0.46
MRPL55-232ENST00000495434 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 LINS1Q8NG48 757 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 MYH3P11055 1940 aa17.9■□□□□ 0.46
MRPL55-232ENST00000495434 KIAA2012Q0VF49 1180 aa17.89■□□□□ 0.45
MRPL55-232ENST00000495434 GCKRQ14397 625 aa17.89■□□□□ 0.45
MRPL55-232ENST00000495434 CTSWP56202 376 aa17.88■□□□□ 0.45
MRPL55-232ENST00000495434 SLFN5Q08AF3 891 aa17.88■□□□□ 0.45
MRPL55-232ENST00000495434 AOC3Q16853 763 aa17.88■□□□□ 0.45
MRPL55-232ENST00000495434 TTLL11Q8NHH1 800 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-232ENST00000495434 PLA2G12BQ9BX93 195 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 TAF1DQ9H5J8 278 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-232ENST00000495434 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 HACL1Q9UJ83 578 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 ZNRF3Q9ULT6 936 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 RTL9Q8NET4 1388 aa17.87■□□□□ 0.45
MRPL55-232ENST00000495434 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
MRPL55-232ENST00000495434 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
MRPL55-232ENST00000495434 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
MRPL55-232ENST00000495434 DUOX1Q9NRD9 1551 aa17.86■□□□□ 0.45
MRPL55-232ENST00000495434 COL4A1P02462 1669 aa17.86■□□□□ 0.45
MRPL55-232ENST00000495434 CASP7P55210 303 aa17.85■□□□□ 0.45
MRPL55-232ENST00000495434 LTBP1Q14766 1721 aa17.85■□□□□ 0.45
MRPL55-232ENST00000495434 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
MRPL55-232ENST00000495434 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
MRPL55-232ENST00000495434 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
MRPL55-232ENST00000495434 GPSM2P81274 684 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-232ENST00000495434 LDHDQ86WU2 507 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
MRPL55-232ENST00000495434 EYA3Q99504 573 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
MRPL55-232ENST00000495434 F6X3S4 739 aa17.83■□□□□ 0.44
MRPL55-232ENST00000495434 EPHX2P34913 555 aa17.83■□□□□ 0.44
MRPL55-232ENST00000495434 CXCL9Q07325 125 aa17.83■□□□□ 0.44
MRPL55-232ENST00000495434 GJA3Q9Y6H8 435 aa17.83■□□□□ 0.44
MRPL55-232ENST00000495434 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
MRPL55-232ENST00000495434 CSF1RP07333 972 aa17.82■□□□□ 0.44
MRPL55-232ENST00000495434 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-232ENST00000495434 TNIP1Q15025 636 aa17.82■□□□□ 0.44
MRPL55-232ENST00000495434 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
MRPL55-232ENST00000495434 TBC1D16Q8TBP0 767 aa17.82■□□□□ 0.44
MRPL55-232ENST00000495434 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-232ENST00000495434 GREM2Q9H772 168 aa17.82■□□□□ 0.44
MRPL55-232ENST00000495434 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-232ENST00000495434 ALDH1L1O75891 902 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 CT47B1P0C2W7 299 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-232ENST00000495434 SCNN1DP51172 638 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 CIAPIN1Q6FI81 312 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 MRPL50Q8N5N7 158 aaKnown RBP17.81■□□□□ 0.44
MRPL55-232ENST00000495434 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 ANKIB1Q9P2G1 1089 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 GGA1Q9UJY5 639 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
MRPL55-232ENST00000495434 PTPRCP08575 1304 aa17.8■□□□□ 0.44
MRPL55-232ENST00000495434 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
MRPL55-232ENST00000495434 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
MRPL55-232ENST00000495434 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
MRPL55-232ENST00000495434 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
MRPL55-232ENST00000495434 XDHP47989 1333 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms