RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 FOXN1O15353 648 aa19.2■□□□□ 0.66
PTPN18-216ENST00000495400 CAPN15O75808 1086 aa19.2■□□□□ 0.66
PTPN18-216ENST00000495400 CXCL9Q07325 125 aa19.2■□□□□ 0.66
PTPN18-216ENST00000495400 TRPM7Q96QT4 1865 aa19.2■□□□□ 0.66
PTPN18-216ENST00000495400 DDX60Q8IY21 1712 aaKnown RBP19.2■□□□□ 0.66
PTPN18-216ENST00000495400 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
PTPN18-216ENST00000495400 TMC4Q7Z404 712 aa19.19■□□□□ 0.66
PTPN18-216ENST00000495400 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
PTPN18-216ENST00000495400 HYPKQ9NX55 129 aa19.19■□□□□ 0.66
PTPN18-216ENST00000495400 GPRC5DQ9NZD1 345 aa19.19■□□□□ 0.66
PTPN18-216ENST00000495400 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
PTPN18-216ENST00000495400 ZNF428Q96B54 188 aa19.18■□□□□ 0.66
PTPN18-216ENST00000495400 AIDAQ96BJ3 306 aa19.18■□□□□ 0.66
PTPN18-216ENST00000495400 ADARB2Q9NS39 739 aaKnown RBP19.18■□□□□ 0.66
PTPN18-216ENST00000495400 ABT1Q9ULW3 272 aaKnown RBP19.18■□□□□ 0.66
PTPN18-216ENST00000495400 CIAPIN1Q6FI81 312 aa19.17■□□□□ 0.66
PTPN18-216ENST00000495400 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
PTPN18-216ENST00000495400 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
PTPN18-216ENST00000495400 MBIPQ9NS73 344 aa19.17■□□□□ 0.66
PTPN18-216ENST00000495400 ATP5J2-PTCD1G3V325 749 aa19.16■□□□□ 0.66
PTPN18-216ENST00000495400 FMR1Q06787 632 aaKnown RBP eCLIP19.16■□□□□ 0.66
PTPN18-216ENST00000495400 TNIP1Q15025 636 aa19.16■□□□□ 0.66
PTPN18-216ENST00000495400 SF3B3Q15393 1217 aaKnown RBP19.16■□□□□ 0.66
PTPN18-216ENST00000495400 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
PTPN18-216ENST00000495400 WBP1LQ9NX94 342 aa19.16■□□□□ 0.66
PTPN18-216ENST00000495400 WDR33Q9C0J8 1336 aaKnown RBP19.16■□□□□ 0.66
PTPN18-216ENST00000495400 LRRC37AA6NMS7 1700 aa19.16■□□□□ 0.66
PTPN18-216ENST00000495400 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
PTPN18-216ENST00000495400 CTCFP49711 727 aaPredicted RBP19.15■□□□□ 0.66
PTPN18-216ENST00000495400 GMPSP49915 693 aaPredicted RBP19.15■□□□□ 0.66
PTPN18-216ENST00000495400 RAD17O75943 681 aa19.14■□□□□ 0.65
PTPN18-216ENST00000495400 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.65
PTPN18-216ENST00000495400 BCL2L13Q9BXK5 485 aa19.14■□□□□ 0.65
PTPN18-216ENST00000495400 CDHR2Q9BYE9 1310 aa19.14■□□□□ 0.65
PTPN18-216ENST00000495400 TRAF5O00463 557 aa19.13■□□□□ 0.65
PTPN18-216ENST00000495400 APAF1O14727 1248 aa19.13■□□□□ 0.65
PTPN18-216ENST00000495400 GNAI1P63096 354 aa19.13■□□□□ 0.65
PTPN18-216ENST00000495400 CELF1Q92879 486 aaKnown RBP19.13■□□□□ 0.65
PTPN18-216ENST00000495400 IFT57Q9NWB7 429 aa19.13■□□□□ 0.65
PTPN18-216ENST00000495400 DUOX1Q9NRD9 1551 aa19.13■□□□□ 0.65
PTPN18-216ENST00000495400 MAP2K1Q02750 393 aaPredicted RBP19.12■□□□□ 0.65
PTPN18-216ENST00000495400 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
PTPN18-216ENST00000495400 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
PTPN18-216ENST00000495400 CST9Q5W186 159 aa19.12■□□□□ 0.65
PTPN18-216ENST00000495400 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
PTPN18-216ENST00000495400 PGAP2Q9UHJ9 254 aa19.12■□□□□ 0.65
PTPN18-216ENST00000495400 YDJCA8MPS7 323 aa19.11■□□□□ 0.65
PTPN18-216ENST00000495400 IRS4O14654 1257 aaPredicted RBP19.11■□□□□ 0.65
PTPN18-216ENST00000495400 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
PTPN18-216ENST00000495400 WASHC4Q2M389 1173 aa19.11■□□□□ 0.65
PTPN18-216ENST00000495400 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
PTPN18-216ENST00000495400 NSFL1CQ9UNZ2 370 aaKnown RBP19.11■□□□□ 0.65
PTPN18-216ENST00000495400 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
PTPN18-216ENST00000495400 ECE1P42892 770 aa19.1■□□□□ 0.65
PTPN18-216ENST00000495400 PAXIP1Q6ZW49 1069 aaPredicted RBP19.1■□□□□ 0.65
PTPN18-216ENST00000495400 ZC3H15Q8WU90 426 aaKnown RBP19.1■□□□□ 0.65
PTPN18-216ENST00000495400 CAPNS2Q96L46 248 aa19.1■□□□□ 0.65
PTPN18-216ENST00000495400 CNOT7Q9UIV1 285 aaKnown RBP19.1■□□□□ 0.65
PTPN18-216ENST00000495400 TLL2Q9Y6L7 1015 aa19.1■□□□□ 0.65
PTPN18-216ENST00000495400 LBX1P52954 281 aa19.09■□□□□ 0.65
PTPN18-216ENST00000495400 ZBTB38Q8NAP3 1195 aaPredicted RBP19.09■□□□□ 0.65
PTPN18-216ENST00000495400 COL4A1P02462 1669 aa19.08■□□□□ 0.65
PTPN18-216ENST00000495400 THSD7BQ9C0I4 1608 aa19.08■□□□□ 0.65
PTPN18-216ENST00000495400 C6orf229H3BNL8 230 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 H7C1D1 291 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 RIMBP2O15034 1052 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 HSP90B1P14625 803 aaKnown RBP19.08■□□□□ 0.64
PTPN18-216ENST00000495400 HIRAP54198 1017 aaPredicted RBP19.08■□□□□ 0.64
PTPN18-216ENST00000495400 RPS8P62241 208 aaKnown RBP19.08■□□□□ 0.64
PTPN18-216ENST00000495400 GPSM2P81274 684 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 CYP4F22Q6NT55 531 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 EYA3Q99504 573 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 GLIS2Q9BZE0 524 aaPredicted RBP19.08■□□□□ 0.64
PTPN18-216ENST00000495400 DBNDD1Q9H9R9 158 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 POLLQ9UGP5 575 aa19.08■□□□□ 0.64
PTPN18-216ENST00000495400 CELF2O95319 508 aaKnown RBP19.07■□□□□ 0.64
PTPN18-216ENST00000495400 HSPA8P11142 646 aaKnown RBP19.07■□□□□ 0.64
PTPN18-216ENST00000495400 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
PTPN18-216ENST00000495400 TRPM4Q8TD43 1214 aa19.07■□□□□ 0.64
PTPN18-216ENST00000495400 DPF2Q92785 391 aa19.07■□□□□ 0.64
PTPN18-216ENST00000495400 GPR101Q96P66 508 aaPredicted RBP19.07■□□□□ 0.64
PTPN18-216ENST00000495400 MYD88Q99836 296 aa19.07■□□□□ 0.64
PTPN18-216ENST00000495400 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
PTPN18-216ENST00000495400 SHTN1A0MZ66 631 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 PSMD14O00487 310 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 GRM1Q13255 1194 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 MICALL2Q8IY33 904 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 C8orf58Q8NAV2 365 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 CCDC191Q8NCU4 936 aa19.06■□□□□ 0.64
PTPN18-216ENST00000495400 ZBTB12Q9Y330 459 aaPredicted RBP19.06■□□□□ 0.64
PTPN18-216ENST00000495400 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
PTPN18-216ENST00000495400 CCDC30Q5VVM6 783 aa19.05■□□□□ 0.64
PTPN18-216ENST00000495400 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
PTPN18-216ENST00000495400 TBC1D16Q8TBP0 767 aa19.05■□□□□ 0.64
PTPN18-216ENST00000495400 SEC31BQ9NQW1 1179 aa19.05■□□□□ 0.64
PTPN18-216ENST00000495400 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
PTPN18-216ENST00000495400 ECE2O60344 883 aa19.04■□□□□ 0.64
PTPN18-216ENST00000495400 PDE8AO60658 829 aa19.04■□□□□ 0.64
PTPN18-216ENST00000495400 DDX58O95786 925 aaKnown RBP19.04■□□□□ 0.64
PTPN18-216ENST00000495400 DOK7Q18PE1 504 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms