RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CELF1Q92879 486 aaKnown RBP21.77■■□□□ 1.08
SNX17-209ENST00000494893 RNF181Q9P0P0 153 aa21.77■■□□□ 1.08
SNX17-209ENST00000494893 TAF1P21675 1872 aa21.77■■□□□ 1.08
SNX17-209ENST00000494893 SOGA3Q5TF21 947 aa21.76■■□□□ 1.07
SNX17-209ENST00000494893 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
SNX17-209ENST00000494893 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
SNX17-209ENST00000494893 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
SNX17-209ENST00000494893 LMNB1P20700 586 aa21.75■■□□□ 1.07
SNX17-209ENST00000494893 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
SNX17-209ENST00000494893 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 CTSWP56202 376 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 TTLL11Q8NHH1 800 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 CCDC85AQ96PX6 553 aaPredicted RBP21.74■■□□□ 1.07
SNX17-209ENST00000494893 PLA2G12BQ9BX93 195 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 NOB1Q9ULX3 412 aaKnown RBP21.74■■□□□ 1.07
SNX17-209ENST00000494893 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
SNX17-209ENST00000494893 BCAR3O75815 825 aa21.73■■□□□ 1.07
SNX17-209ENST00000494893 BBOX1O75936 387 aa21.73■■□□□ 1.07
SNX17-209ENST00000494893 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
SNX17-209ENST00000494893 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
SNX17-209ENST00000494893 CC2D2BQ6DHV5 1058 aa21.72■■□□□ 1.07
SNX17-209ENST00000494893 RTKN2Q8IZC4 609 aa21.72■■□□□ 1.07
SNX17-209ENST00000494893 GRM8O00222 908 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 CCDC152Q4G0S7 254 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 EPHA10Q5JZY3 1008 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 SP8Q8IXZ3 490 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 GREM2Q9H772 168 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
SNX17-209ENST00000494893 LRRC37AA6NMS7 1700 aa21.71■■□□□ 1.07
SNX17-209ENST00000494893 COL4A5P29400 1685 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 FOXO4P98177 505 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 PSMD1Q99460 953 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 TNNQ9UQP3 1299 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 RTL9Q8NET4 1388 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 DUOX1Q9NRD9 1551 aa21.7■■□□□ 1.06
SNX17-209ENST00000494893 CSF1RP07333 972 aa21.69■■□□□ 1.06
SNX17-209ENST00000494893 NBPF7P0C2Y1 421 aaPredicted RBP21.69■■□□□ 1.06
SNX17-209ENST00000494893 RPS8P62241 208 aaKnown RBP21.69■■□□□ 1.06
SNX17-209ENST00000494893 KAZALD1Q96I82 304 aa21.69■■□□□ 1.06
SNX17-209ENST00000494893 UTYO14607 1347 aa21.69■■□□□ 1.06
SNX17-209ENST00000494893 TIAM2Q8IVF5 1701 aa21.69■■□□□ 1.06
SNX17-209ENST00000494893 CCDC88AQ3V6T2 1871 aa21.69■■□□□ 1.06
SNX17-209ENST00000494893 KIF16BQ96L93 1317 aa21.67■■□□□ 1.06
SNX17-209ENST00000494893 TMC4Q7Z404 712 aa21.67■■□□□ 1.06
SNX17-209ENST00000494893 ZNF526Q8TF50 670 aaPredicted RBP21.67■■□□□ 1.06
SNX17-209ENST00000494893 SUCLG2Q96I99 432 aa21.67■■□□□ 1.06
SNX17-209ENST00000494893 RTFDC1Q9BY42 306 aaPredicted RBP21.67■■□□□ 1.06
SNX17-209ENST00000494893 C9orf78Q9NZ63 289 aaPredicted RBP21.67■■□□□ 1.06
SNX17-209ENST00000494893 MYH3P11055 1940 aa21.67■■□□□ 1.06
SNX17-209ENST00000494893 FAM161AQ3B820 660 aa21.66■■□□□ 1.06
SNX17-209ENST00000494893 ARHGAP45Q92619 1136 aa21.66■■□□□ 1.06
SNX17-209ENST00000494893 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
SNX17-209ENST00000494893 USP44Q9H0E7 712 aa21.66■■□□□ 1.06
SNX17-209ENST00000494893 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
SNX17-209ENST00000494893 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
SNX17-209ENST00000494893 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
SNX17-209ENST00000494893 GRIPAP1Q4V328 841 aa21.65■■□□□ 1.06
SNX17-209ENST00000494893 LTBP1Q14766 1721 aa21.65■■□□□ 1.06
SNX17-209ENST00000494893 TRIM27P14373 513 aa21.64■■□□□ 1.05
SNX17-209ENST00000494893 GPSM2P81274 684 aa21.64■■□□□ 1.05
SNX17-209ENST00000494893 MPNDQ8N594 471 aa21.64■■□□□ 1.05
SNX17-209ENST00000494893 ITGA6P23229 1130 aa21.63■■□□□ 1.05
SNX17-209ENST00000494893 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
SNX17-209ENST00000494893 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
SNX17-209ENST00000494893 ANKRD18AQ8IVF6 992 aa21.63■■□□□ 1.05
SNX17-209ENST00000494893 CCT4P50991 539 aaKnown RBP21.62■■□□□ 1.05
SNX17-209ENST00000494893 FRAT1Q92837 279 aaPredicted RBP21.62■■□□□ 1.05
SNX17-209ENST00000494893 ATF7IPQ6VMQ6 1270 aa21.61■■□□□ 1.05
SNX17-209ENST00000494893 ANKRD44Q8N8A2 993 aa21.61■■□□□ 1.05
SNX17-209ENST00000494893 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
SNX17-209ENST00000494893 POLLQ9UGP5 575 aa21.61■■□□□ 1.05
SNX17-209ENST00000494893 GLTPD2A6NH11 291 aa21.6■■□□□ 1.05
SNX17-209ENST00000494893 AOC3Q16853 763 aa21.6■■□□□ 1.05
SNX17-209ENST00000494893 INTS3Q68E01 1043 aaKnown RBP21.6■■□□□ 1.05
SNX17-209ENST00000494893 TMX4Q9H1E5 349 aaPredicted RBP21.6■■□□□ 1.05
SNX17-209ENST00000494893 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
SNX17-209ENST00000494893 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
SNX17-209ENST00000494893 BSDC1Q9NW68 430 aaPredicted RBP21.6■■□□□ 1.05
SNX17-209ENST00000494893 NSFL1CQ9UNZ2 370 aaKnown RBP21.6■■□□□ 1.05
SNX17-209ENST00000494893 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
SNX17-209ENST00000494893 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
SNX17-209ENST00000494893 RABL6Q3YEC7 729 aaPredicted RBP21.59■■□□□ 1.05
SNX17-209ENST00000494893 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
SNX17-209ENST00000494893 BICC1Q9H694 974 aaKnown RBP21.59■■□□□ 1.05
SNX17-209ENST00000494893 PODXL2Q9NZ53 605 aa21.59■■□□□ 1.05
SNX17-209ENST00000494893 SPEF2Q9C093 1822 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 FZD9O00144 591 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 KIF3CO14782 793 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 IPO8O15397 1037 aaKnown RBP21.58■■□□□ 1.05
SNX17-209ENST00000494893 PPIP5K2O43314 1243 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 TBC1D16Q8TBP0 767 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 CLUAP1Q96AJ1 413 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 MINPP1Q9UNW1 487 aa21.58■■□□□ 1.05
SNX17-209ENST00000494893 ANKRD18BA2A2Z9 1011 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 ZKSCAN2Q63HK3 967 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 LARGE2Q8N3Y3 721 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 SUPT20HQ8NEM7 779 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms