RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSPAN4-212ENST00000494815 UBN2Q6ZU65 1347 aa22.46■■□□□ 1.19
TSPAN4-212ENST00000494815 CNTNAP4Q9C0A0 1308 aa22.46■■□□□ 1.19
TSPAN4-212ENST00000494815 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
TSPAN4-212ENST00000494815 BTAF1O14981 1849 aa22.46■■□□□ 1.19
TSPAN4-212ENST00000494815 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
TSPAN4-212ENST00000494815 LINC00116Q8NCU8 138 aa22.45■■□□□ 1.18
TSPAN4-212ENST00000494815 DBNLQ9UJU6 430 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-212ENST00000494815 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
TSPAN4-212ENST00000494815 AK7Q96M32 723 aa22.45■■□□□ 1.18
TSPAN4-212ENST00000494815 IRS4O14654 1257 aaPredicted RBP22.44■■□□□ 1.18
TSPAN4-212ENST00000494815 RABEP1Q15276 862 aa22.44■■□□□ 1.18
TSPAN4-212ENST00000494815 FBXO41Q8TF61 875 aa22.44■■□□□ 1.18
TSPAN4-212ENST00000494815 RGL2O15211 777 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 CTSWP56202 376 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 IFIT5Q13325 482 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 PTF1AQ7RTS3 328 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 ATP5JP18859 108 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 TTLL11Q8NHH1 800 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
TSPAN4-212ENST00000494815 PDE8AO60658 829 aa22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 RC3H1Q5TC82 1133 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 SYNE4Q8N205 404 aa22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 ZNF594Q96JF6 807 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 SGSM2O43147 1006 aa22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 CLEC4GQ6UXB4 293 aa22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 ANO2Q9NQ90 1003 aa22.42■■□□□ 1.18
TSPAN4-212ENST00000494815 HIP1O00291 1037 aa22.41■■□□□ 1.18
TSPAN4-212ENST00000494815 LRRC24Q50LG9 513 aa22.41■■□□□ 1.18
TSPAN4-212ENST00000494815 RUFY2Q8WXA3 655 aa22.41■■□□□ 1.18
TSPAN4-212ENST00000494815 SH3TC1Q8TE82 1336 aa22.41■■□□□ 1.18
TSPAN4-212ENST00000494815 TRAK2O60296 914 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 MCCP23508 829 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 DIAPH3Q9NSV4 1193 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 MYH3P11055 1940 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 FAM182BQ5T319 152 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 DBNDD2Q9BQY9 259 aa22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 UTP14AQ9BVJ6 771 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-212ENST00000494815 HSP90B1P14625 803 aaKnown RBP22.39■■□□□ 1.18
TSPAN4-212ENST00000494815 SUSD4Q5VX71 490 aa22.39■■□□□ 1.18
TSPAN4-212ENST00000494815 BOLA2Q9H3K6 86 aa22.39■■□□□ 1.18
TSPAN4-212ENST00000494815 CEP126Q9P2H0 1117 aa22.39■■□□□ 1.18
TSPAN4-212ENST00000494815 BCORQ6W2J9 1755 aa22.39■■□□□ 1.18
TSPAN4-212ENST00000494815 ZNF609O15014 1411 aa22.39■■□□□ 1.17
TSPAN4-212ENST00000494815 SBF2Q86WG5 1849 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 ANKRD18BA2A2Z9 1011 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 DDX11L8A8MPP1 907 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 ITGA6P23229 1130 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 ANAPC15P60006 121 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 PUS3Q9BZE2 481 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 GZF1Q9H116 711 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 GREM2Q9H772 168 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 IL25Q9H293 177 aa22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 CCNL1Q9UK58 526 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 NIP7Q9Y221 180 aaKnown RBP eCLIP22.38■■□□□ 1.17
TSPAN4-212ENST00000494815 IL17RAQ96F46 866 aa22.37■■□□□ 1.17
TSPAN4-212ENST00000494815 AKAP2Q9Y2D5 859 aa22.37■■□□□ 1.17
TSPAN4-212ENST00000494815 MRE11P49959 708 aa22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 CWC27Q6UX04 472 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 CCDC85AQ96PX6 553 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 LY75O60449 1722 aa22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 RPS6KA4O75676 772 aa22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 PANK2Q9BZ23 570 aa22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 RFX7Q2KHR2 1363 aa22.36■■□□□ 1.17
TSPAN4-212ENST00000494815 RAD50Q92878 1312 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 NTSR2O95665 410 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 KCNQ4P56696 695 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 NEUROD6Q96NK8 337 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 HAUS7Q99871 368 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 BCL11BQ9C0K0 894 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 A0A1B0GUL7 405 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 DDIT3P35638 169 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 GLIPR1L2Q4G1C9 344 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 KIAA1211Q6ZU35 1233 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 FSD1Q9BTV5 496 aa22.35■■□□□ 1.17
TSPAN4-212ENST00000494815 K7ELQ4 463 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-212ENST00000494815 LDHAL6AQ6ZMR3 332 aa22.34■■□□□ 1.17
TSPAN4-212ENST00000494815 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-212ENST00000494815 RIPOR2Q9Y4F9 1068 aa22.34■■□□□ 1.17
TSPAN4-212ENST00000494815 CLCN1P35523 988 aa22.33■■□□□ 1.17
TSPAN4-212ENST00000494815 TIMM10P62072 90 aa22.33■■□□□ 1.17
TSPAN4-212ENST00000494815 TICAM2Q86XR7 235 aa22.33■■□□□ 1.17
TSPAN4-212ENST00000494815 LSG1Q9H089 658 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-212ENST00000494815 SCN7AQ01118 1682 aa22.33■■□□□ 1.17
TSPAN4-212ENST00000494815 SNRKQ9NRH2 765 aa22.33■■□□□ 1.16
TSPAN4-212ENST00000494815 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.16
TSPAN4-212ENST00000494815 ST18O60284 1047 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 CD2BP2O95400 341 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 HSPA4P34932 840 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 ZMYND15Q9H091 742 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 LRP5O75197 1615 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 RTL9Q8NET4 1388 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 NARFQ9UHQ1 456 aa22.32■■□□□ 1.16
TSPAN4-212ENST00000494815 LAMB2P55268 1798 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms