RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CTSWP56202 376 aa14.05□□□□□ -0.16
APTX-230ENST00000494649 RASSF7Q02833 373 aa14.05□□□□□ -0.16
APTX-230ENST00000494649 DDX46Q7L014 1031 aaKnown RBP14.05□□□□□ -0.16
APTX-230ENST00000494649 FTSJ3Q8IY81 847 aaKnown RBP14.05□□□□□ -0.16
APTX-230ENST00000494649 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
APTX-230ENST00000494649 CDHR2Q9BYE9 1310 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 USP44Q9H0E7 712 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 GREM2Q9H772 168 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
APTX-230ENST00000494649 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 ARHGAP45Q92619 1136 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 PDZRN3Q9UPQ7 1066 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
APTX-230ENST00000494649 CCT4P50991 539 aaKnown RBP14.03□□□□□ -0.16
APTX-230ENST00000494649 SF3B3Q15393 1217 aaKnown RBP14.03□□□□□ -0.16
APTX-230ENST00000494649 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 MEIS3Q99687 375 aa14.03□□□□□ -0.16
APTX-230ENST00000494649 GRIN3BO60391 1043 aa14.02□□□□□ -0.16
APTX-230ENST00000494649 HOXA10P31260 410 aaPredicted RBP14.02□□□□□ -0.16
APTX-230ENST00000494649 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.16
APTX-230ENST00000494649 ITPRIPQ8IWB1 547 aa14.02□□□□□ -0.16
APTX-230ENST00000494649 FOXO4P98177 505 aa14.02□□□□□ -0.17
APTX-230ENST00000494649 GRAPQ13588 217 aa14.02□□□□□ -0.17
APTX-230ENST00000494649 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
APTX-230ENST00000494649 DZIP1LQ8IYY4 767 aaKnown RBP14.02□□□□□ -0.17
APTX-230ENST00000494649 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
APTX-230ENST00000494649 KAZALD1Q96I82 304 aa14.02□□□□□ -0.17
APTX-230ENST00000494649 CRAMP1Q96RY5 1269 aa14.02□□□□□ -0.17
APTX-230ENST00000494649 BICC1Q9H694 974 aaKnown RBP14.02□□□□□ -0.17
APTX-230ENST00000494649 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
APTX-230ENST00000494649 ITGA6P23229 1130 aa14□□□□□ -0.17
APTX-230ENST00000494649 INTS3Q68E01 1043 aaKnown RBP14□□□□□ -0.17
APTX-230ENST00000494649 C7orf43Q8WVR3 580 aa14□□□□□ -0.17
APTX-230ENST00000494649 NFKBIEO00221 500 aa14□□□□□ -0.17
APTX-230ENST00000494649 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
APTX-230ENST00000494649 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
APTX-230ENST00000494649 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 PRELPP51888 382 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
APTX-230ENST00000494649 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 COG6Q9Y2V7 657 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 LRRFIP2Q9Y608 721 aaKnown RBP13.99□□□□□ -0.17
APTX-230ENST00000494649 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
APTX-230ENST00000494649 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
APTX-230ENST00000494649 MYH3P11055 1940 aa13.98□□□□□ -0.17
APTX-230ENST00000494649 UTYO14607 1347 aa13.98□□□□□ -0.17
APTX-230ENST00000494649 ANKRD18AQ8IVF6 992 aa13.98□□□□□ -0.17
APTX-230ENST00000494649 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
APTX-230ENST00000494649 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
APTX-230ENST00000494649 CSF1RP07333 972 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 GPR101Q96P66 508 aaPredicted RBP13.97□□□□□ -0.17
APTX-230ENST00000494649 TAOK3Q9H2K8 898 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 ATP6V0A2Q9Y487 856 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 BBOX1O75936 387 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 IFIT5Q13325 482 aaKnown RBP13.97□□□□□ -0.17
APTX-230ENST00000494649 TMX4Q9H1E5 349 aaPredicted RBP13.97□□□□□ -0.17
APTX-230ENST00000494649 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
APTX-230ENST00000494649 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
APTX-230ENST00000494649 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
APTX-230ENST00000494649 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
APTX-230ENST00000494649 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
APTX-230ENST00000494649 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
APTX-230ENST00000494649 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
APTX-230ENST00000494649 CDC5LQ99459 802 aaKnown RBP13.96□□□□□ -0.17
APTX-230ENST00000494649 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
APTX-230ENST00000494649 GPSM2P81274 684 aa13.95□□□□□ -0.18
APTX-230ENST00000494649 DPP8Q6V1X1 898 aaPredicted RBP13.95□□□□□ -0.18
APTX-230ENST00000494649 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
APTX-230ENST00000494649 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
APTX-230ENST00000494649 MPHOSPH8Q99549 860 aa13.95□□□□□ -0.18
APTX-230ENST00000494649 ANKIB1Q9P2G1 1089 aa13.95□□□□□ -0.18
APTX-230ENST00000494649 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
APTX-230ENST00000494649 MPNDQ8N594 471 aa13.94□□□□□ -0.18
APTX-230ENST00000494649 HELBQ8NG08 1087 aaPredicted RBP13.94□□□□□ -0.18
APTX-230ENST00000494649 SNAP23O00161 211 aa13.94□□□□□ -0.18
APTX-230ENST00000494649 GNAI3P08754 354 aa13.94□□□□□ -0.18
APTX-230ENST00000494649 RRP1P56182 461 aaKnown RBP13.94□□□□□ -0.18
APTX-230ENST00000494649 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
APTX-230ENST00000494649 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
APTX-230ENST00000494649 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
APTX-230ENST00000494649 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
APTX-230ENST00000494649 FER1L6Q2WGJ9 1857 aa13.93□□□□□ -0.18
APTX-230ENST00000494649 ZBTB7BO15156 539 aaPredicted RBP13.93□□□□□ -0.18
APTX-230ENST00000494649 MVPQ14764 893 aaKnown RBP13.93□□□□□ -0.18
APTX-230ENST00000494649 AOC3Q16853 763 aa13.93□□□□□ -0.18
APTX-230ENST00000494649 RABL6Q3YEC7 729 aaPredicted RBP13.93□□□□□ -0.18
APTX-230ENST00000494649 SIL1Q9H173 461 aa13.93□□□□□ -0.18
APTX-230ENST00000494649 SNED1Q8TER0 1413 aa13.93□□□□□ -0.18
APTX-230ENST00000494649 C6orf229H3BNL8 230 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 TAF5LO75529 589 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 LMNB1P20700 586 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 LDHAL6AQ6ZMR3 332 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms