RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-209ENST00000494464 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-209ENST00000494464 COL4A1P02462 1669 aa16.9■□□□□ 0.3
ERCC3-209ENST00000494464 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 POTECB2RU33 542 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 FZD9O00144 591 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 TCERG1O14776 1098 aaKnown RBP16.89■□□□□ 0.3
ERCC3-209ENST00000494464 VAMP4O75379 141 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 SLC4A2P04920 1241 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 PCCAP05165 728 aaPredicted RBP16.89■□□□□ 0.3
ERCC3-209ENST00000494464 SP8Q8IXZ3 490 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.3
ERCC3-209ENST00000494464 LTBP1Q14766 1721 aa16.89■□□□□ 0.3
ERCC3-209ENST00000494464 DDNO94850 711 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-209ENST00000494464 FLIIQ13045 1269 aa16.89■□□□□ 0.29
ERCC3-209ENST00000494464 G2E3Q7L622 706 aa16.89■□□□□ 0.29
ERCC3-209ENST00000494464 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-209ENST00000494464 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
ERCC3-209ENST00000494464 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-209ENST00000494464 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
ERCC3-209ENST00000494464 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
ERCC3-209ENST00000494464 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
ERCC3-209ENST00000494464 ADAMTSL1Q8N6G6 1762 aa16.86■□□□□ 0.29
ERCC3-209ENST00000494464 PDE8AO60658 829 aa16.86■□□□□ 0.29
ERCC3-209ENST00000494464 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
ERCC3-209ENST00000494464 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
ERCC3-209ENST00000494464 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
ERCC3-209ENST00000494464 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
ERCC3-209ENST00000494464 APLP1P51693 650 aa16.85■□□□□ 0.29
ERCC3-209ENST00000494464 FKBP5Q13451 457 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-209ENST00000494464 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-209ENST00000494464 GPC2Q8N158 579 aa16.85■□□□□ 0.29
ERCC3-209ENST00000494464 MPNDQ8N594 471 aa16.85■□□□□ 0.29
ERCC3-209ENST00000494464 EIF6P56537 245 aaKnown RBP16.84■□□□□ 0.29
ERCC3-209ENST00000494464 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
ERCC3-209ENST00000494464 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
ERCC3-209ENST00000494464 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
ERCC3-209ENST00000494464 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
ERCC3-209ENST00000494464 AOC3Q16853 763 aa16.83■□□□□ 0.28
ERCC3-209ENST00000494464 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
ERCC3-209ENST00000494464 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
ERCC3-209ENST00000494464 E9PSI1 815 aa16.82■□□□□ 0.28
ERCC3-209ENST00000494464 CTSWP56202 376 aa16.82■□□□□ 0.28
ERCC3-209ENST00000494464 LINS1Q8NG48 757 aa16.82■□□□□ 0.28
ERCC3-209ENST00000494464 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
ERCC3-209ENST00000494464 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
ERCC3-209ENST00000494464 HACL1Q9UJ83 578 aa16.81■□□□□ 0.28
ERCC3-209ENST00000494464 GTF3C3Q9Y5Q9 886 aa16.81■□□□□ 0.28
ERCC3-209ENST00000494464 SPEF2Q9C093 1822 aa16.81■□□□□ 0.28
ERCC3-209ENST00000494464 H7C1W4 665 aa16.8■□□□□ 0.28
ERCC3-209ENST00000494464 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
ERCC3-209ENST00000494464 GCKRQ14397 625 aa16.8■□□□□ 0.28
ERCC3-209ENST00000494464 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-209ENST00000494464 SEC31BQ9NQW1 1179 aa16.8■□□□□ 0.28
ERCC3-209ENST00000494464 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
ERCC3-209ENST00000494464 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
ERCC3-209ENST00000494464 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
ERCC3-209ENST00000494464 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
ERCC3-209ENST00000494464 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
ERCC3-209ENST00000494464 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 POTEJP0CG39 1038 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 EPHX2P34913 555 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 CASP7P55210 303 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 TTLL11Q8NHH1 800 aa16.78■□□□□ 0.28
ERCC3-209ENST00000494464 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
ERCC3-209ENST00000494464 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.28
ERCC3-209ENST00000494464 SCNN1DP51172 638 aa16.77■□□□□ 0.28
ERCC3-209ENST00000494464 GPSM2P81274 684 aa16.77■□□□□ 0.28
ERCC3-209ENST00000494464 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
ERCC3-209ENST00000494464 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
ERCC3-209ENST00000494464 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
ERCC3-209ENST00000494464 F6X3S4 739 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 CXCL9Q07325 125 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 BEND3Q5T5X7 828 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.27
ERCC3-209ENST00000494464 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.27
ERCC3-209ENST00000494464 EYA3Q99504 573 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 POLLQ9UGP5 575 aa16.77■□□□□ 0.27
ERCC3-209ENST00000494464 PSME4Q14997 1843 aa16.76■□□□□ 0.27
ERCC3-209ENST00000494464 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-209ENST00000494464 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
ERCC3-209ENST00000494464 TBC1D16Q8TBP0 767 aa16.76■□□□□ 0.27
ERCC3-209ENST00000494464 GREM2Q9H772 168 aa16.76■□□□□ 0.27
ERCC3-209ENST00000494464 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
ERCC3-209ENST00000494464 C6orf229H3BNL8 230 aa16.75■□□□□ 0.27
ERCC3-209ENST00000494464 CIAPIN1Q6FI81 312 aa16.75■□□□□ 0.27
ERCC3-209ENST00000494464 XDHP47989 1333 aa16.74■□□□□ 0.27
ERCC3-209ENST00000494464 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
ERCC3-209ENST00000494464 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-209ENST00000494464 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
ERCC3-209ENST00000494464 DNAJC5GQ8N7S2 189 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms