RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 SRGAP3O43295 1099 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 RAB11FIP3O75154 756 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 HSPA4P34932 840 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 FUCA2Q9BTY2 467 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 METTL22Q9BUU2 404 aaPredicted RBP19.75■□□□□ 0.75
SYP-208ENST00000494396 PRDM10Q9NQV6 1147 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 ASAP1Q9ULH1 1129 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 BCL9O00512 1426 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 NGLY1Q96IV0 654 aa19.75■□□□□ 0.75
SYP-208ENST00000494396 TEX13AQ9BXU3 409 aaPredicted RBP19.75■□□□□ 0.75
SYP-208ENST00000494396 NBPF26B4DH59 902 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
SYP-208ENST00000494396 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 NBPF10Q6P3W6 841 aaKnown RBP19.74■□□□□ 0.75
SYP-208ENST00000494396 NBPF15Q8N660 670 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 C8orf37Q96NL8 207 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 ATG3Q9NT62 314 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 ITGB4P16144 1822 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 GRM8O00222 908 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
SYP-208ENST00000494396 ZHX1Q9UKY1 873 aaPredicted RBP19.74■□□□□ 0.75
SYP-208ENST00000494396 PALD1Q9ULE6 856 aa19.74■□□□□ 0.75
SYP-208ENST00000494396 UTYO14607 1347 aa19.73■□□□□ 0.75
SYP-208ENST00000494396 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
SYP-208ENST00000494396 IGKV5-2P06315 115 aa19.73■□□□□ 0.75
SYP-208ENST00000494396 MTX1Q13505 466 aa19.73■□□□□ 0.75
SYP-208ENST00000494396 PLBD2Q8NHP8 589 aa19.73■□□□□ 0.75
SYP-208ENST00000494396 A1BGP04217 495 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 CBX1P83916 185 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
SYP-208ENST00000494396 NEURL1BA8MQ27 555 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 STX6O43752 255 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 CCDC192P0DO97 292 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 MYD88Q99836 296 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 OGFRQ9NZT2 677 aa19.72■□□□□ 0.75
SYP-208ENST00000494396 ZNF830Q96NB3 372 aaPredicted RBP19.71■□□□□ 0.75
SYP-208ENST00000494396 ARID3AQ99856 593 aa19.71■□□□□ 0.75
SYP-208ENST00000494396 F13A1P00488 732 aa19.71■□□□□ 0.75
SYP-208ENST00000494396 ATP2B3Q16720 1220 aa19.71■□□□□ 0.75
SYP-208ENST00000494396 TSHZ3Q63HK5 1081 aa19.71■□□□□ 0.75
SYP-208ENST00000494396 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 STARD3NLO95772 234 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 GCKRQ14397 625 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 VPS72Q15906 364 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 RHPN1Q8TCX5 695 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 GDPD2Q9HCC8 539 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 LIMCH1Q9UPQ0 1083 aa19.7■□□□□ 0.74
SYP-208ENST00000494396 RIOK3O14730 519 aaKnown RBP19.69■□□□□ 0.74
SYP-208ENST00000494396 GABPB1Q06547 395 aaPredicted RBP19.69■□□□□ 0.74
SYP-208ENST00000494396 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
SYP-208ENST00000494396 KIF1BPQ96EK5 621 aa19.69■□□□□ 0.74
SYP-208ENST00000494396 IL1RAPL2Q9NP60 686 aa19.69■□□□□ 0.74
SYP-208ENST00000494396 RAD50Q92878 1312 aa19.69■□□□□ 0.74
SYP-208ENST00000494396 FNBP4Q8N3X1 1017 aaPredicted RBP19.69■□□□□ 0.74
SYP-208ENST00000494396 MARCH10Q8NA82 808 aaPredicted RBP19.69■□□□□ 0.74
SYP-208ENST00000494396 CNPY2Q9Y2B0 182 aa19.69■□□□□ 0.74
SYP-208ENST00000494396 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
SYP-208ENST00000494396 DNAJC10Q8IXB1 793 aa19.68■□□□□ 0.74
SYP-208ENST00000494396 TTC14Q96N46 770 aa19.68■□□□□ 0.74
SYP-208ENST00000494396 PAXBP1Q9Y5B6 917 aa19.68■□□□□ 0.74
SYP-208ENST00000494396 ARFGEF2Q9Y6D5 1785 aa19.68■□□□□ 0.74
SYP-208ENST00000494396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.67■□□□□ 0.74
SYP-208ENST00000494396 ZSCAN31Q96LW9 406 aaPredicted RBP19.67■□□□□ 0.74
SYP-208ENST00000494396 KAT6BQ8WYB5 2073 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 DOT1LQ8TEK3 1739 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 CCDC171Q6TFL3 1326 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 SMTNL1A8MU46 457 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 SYT1P21579 422 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 TTLL7Q6ZT98 887 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 FAM200AQ8TCP9 573 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 RILPL2Q969X0 211 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
SYP-208ENST00000494396 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
SYP-208ENST00000494396 FAM193AP78312 1265 aa19.66■□□□□ 0.74
SYP-208ENST00000494396 SUCLG2Q96I99 432 aa19.66■□□□□ 0.74
SYP-208ENST00000494396 KCNF1Q9H3M0 494 aa19.66■□□□□ 0.74
SYP-208ENST00000494396 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
SYP-208ENST00000494396 CGNQ9P2M7 1197 aaKnown RBP19.66■□□□□ 0.74
SYP-208ENST00000494396 AFDNP55196 1824 aaKnown RBP19.66■□□□□ 0.74
SYP-208ENST00000494396 FAM98CQ17RN3 349 aaKnown RBP19.66■□□□□ 0.74
SYP-208ENST00000494396 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
SYP-208ENST00000494396 KAZALD1Q96I82 304 aa19.66■□□□□ 0.74
SYP-208ENST00000494396 ELP1O95163 1332 aa19.65■□□□□ 0.74
SYP-208ENST00000494396 ATP5J2-PTCD1G3V325 749 aa19.64■□□□□ 0.74
SYP-208ENST00000494396 TSC1Q92574 1164 aa19.64■□□□□ 0.74
SYP-208ENST00000494396 BICC1Q9H694 974 aaKnown RBP19.64■□□□□ 0.74
SYP-208ENST00000494396 CAVIN2O95810 425 aa19.64■□□□□ 0.73
SYP-208ENST00000494396 USP21Q9UK80 565 aa19.64■□□□□ 0.73
SYP-208ENST00000494396 SGSM2O43147 1006 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 OS9Q13438 667 aaPredicted RBP19.63■□□□□ 0.73
SYP-208ENST00000494396 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
SYP-208ENST00000494396 SLC4A9Q96Q91 983 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 PYCARDQ9ULZ3 195 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 A0A0G2JS52 829 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 HSPA1LP34931 641 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 C17orf53Q8N3J3 647 aaPredicted RBP19.63■□□□□ 0.73
SYP-208ENST00000494396 ACSBG1Q96GR2 724 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 ZBTB3Q9H5J0 574 aa19.63■□□□□ 0.73
SYP-208ENST00000494396 NUP188Q5SRE5 1749 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms