RNA–Protein interactions for RNA: ENST00000494343.5

FGD2-210, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 2,931 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-210ENST00000494343 ANO6Q4KMQ2 910 aa16.7■□□□□ 0.26
FGD2-210ENST00000494343 CCDC83Q8IWF9 413 aa16.7■□□□□ 0.26
FGD2-210ENST00000494343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.26
FGD2-210ENST00000494343 LARGE1O95461 756 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
FGD2-210ENST00000494343 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 LIG1P18858 919 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 EVA1CP58658 441 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 IPO4Q8TEX9 1081 aaKnown RBP16.69■□□□□ 0.26
FGD2-210ENST00000494343 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 LSG1Q9H089 658 aaKnown RBP16.69■□□□□ 0.26
FGD2-210ENST00000494343 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 FAM193AP78312 1265 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
FGD2-210ENST00000494343 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
FGD2-210ENST00000494343 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
FGD2-210ENST00000494343 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
FGD2-210ENST00000494343 KRT85P78386 507 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 GNAI3P08754 354 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 CKAP2LQ8IYA6 745 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
FGD2-210ENST00000494343 ELP1O95163 1332 aa16.68■□□□□ 0.26
FGD2-210ENST00000494343 PARP4Q9UKK3 1724 aaKnown RBP16.68■□□□□ 0.26
FGD2-210ENST00000494343 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
FGD2-210ENST00000494343 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
FGD2-210ENST00000494343 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
FGD2-210ENST00000494343 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
FGD2-210ENST00000494343 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
FGD2-210ENST00000494343 SLC20A2Q08357 652 aa16.67■□□□□ 0.26
FGD2-210ENST00000494343 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
FGD2-210ENST00000494343 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
FGD2-210ENST00000494343 CPA1P15085 419 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 CCDC144BQ3MJ40 725 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 CDC25BP30305 580 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 RBM6P78332 1123 aaKnown RBP16.66■□□□□ 0.26
FGD2-210ENST00000494343 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 ERO1AQ96HE7 468 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
FGD2-210ENST00000494343 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
FGD2-210ENST00000494343 DTNBO60941 627 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
FGD2-210ENST00000494343 HOXB7P09629 217 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 RBM43Q6ZSC3 357 aaKnown RBP16.65■□□□□ 0.26
FGD2-210ENST00000494343 ZCRB1Q8TBF4 217 aaKnown RBP16.65■□□□□ 0.26
FGD2-210ENST00000494343 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 IL2RBP14784 551 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 ZNF165P49910 485 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 PTPN14Q15678 1187 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
FGD2-210ENST00000494343 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
FGD2-210ENST00000494343 DDX19AQ9NUU7 478 aaKnown RBP16.65■□□□□ 0.26
FGD2-210ENST00000494343 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.26
FGD2-210ENST00000494343 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
FGD2-210ENST00000494343 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
FGD2-210ENST00000494343 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.64■□□□□ 0.25
FGD2-210ENST00000494343 V9GYY5 206 aaPredicted RBP16.64■□□□□ 0.25
FGD2-210ENST00000494343 NEMFO60524 1076 aa16.64■□□□□ 0.25
FGD2-210ENST00000494343 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
FGD2-210ENST00000494343 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
FGD2-210ENST00000494343 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
FGD2-210ENST00000494343 C5P01031 1676 aa16.64■□□□□ 0.25
FGD2-210ENST00000494343 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 TULP2O00295 520 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 ELF2Q15723 593 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 PI4K2BQ8TCG2 481 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 USP27XA6NNY8 438 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
FGD2-210ENST00000494343 CLSTN2Q9H4D0 955 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
FGD2-210ENST00000494343 PCDH11XQ9BZA7 1347 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 PCDH11YQ9BZA8 1340 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
FGD2-210ENST00000494343 CABP4P57796 275 aa16.62■□□□□ 0.25
FGD2-210ENST00000494343 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
FGD2-210ENST00000494343 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
FGD2-210ENST00000494343 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
FGD2-210ENST00000494343 MRC1P22897 1456 aa16.62■□□□□ 0.25
FGD2-210ENST00000494343 ME3Q16798 604 aa16.62■□□□□ 0.25
FGD2-210ENST00000494343 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
FGD2-210ENST00000494343 SCAND2PQ9GZW5 306 aaPredicted RBP16.62■□□□□ 0.25
FGD2-210ENST00000494343 CAVIN2O95810 425 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms