RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SNIP1Q8TAD8 396 aaKnown RBP11.27□□□□□ -0.61
RIF1-211ENST00000494333 CDK15Q96Q40 435 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 A0A1W2PP64 1363 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 USP31Q70CQ4 1352 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 USP47Q96K76 1375 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 CRB1P82279 1406 aa11.26□□□□□ -0.61
RIF1-211ENST00000494333 TRIM37O94972 964 aa11.26□□□□□ -0.61
RIF1-211ENST00000494333 WDR17Q8IZU2 1322 aa11.26□□□□□ -0.61
RIF1-211ENST00000494333 PIK3C2AO00443 1686 aa11.26□□□□□ -0.61
RIF1-211ENST00000494333 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
RIF1-211ENST00000494333 TTC24A2A3L6 582 aaPredicted RBP11.25□□□□□ -0.61
RIF1-211ENST00000494333 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
RIF1-211ENST00000494333 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
RIF1-211ENST00000494333 EDC4Q6P2E9 1401 aaKnown RBP11.25□□□□□ -0.61
RIF1-211ENST00000494333 APBA3O96018 575 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 DDB1Q16531 1140 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 NINLQ9Y2I6 1382 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
RIF1-211ENST00000494333 EP400Q96L91 3159 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 J3QL48 77 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 SOX11P35716 441 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 GRM5P41594 1212 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 MCCD1P59942 119 aaPredicted RBP11.23□□□□□ -0.61
RIF1-211ENST00000494333 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
RIF1-211ENST00000494333 COG3Q96JB2 828 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 ALG2Q9H553 416 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 CDV3Q9UKY7 258 aaKnown RBP11.23□□□□□ -0.61
RIF1-211ENST00000494333 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
RIF1-211ENST00000494333 GFRA3O60609 400 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 FBLN1P23142 703 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
RIF1-211ENST00000494333 ADAMTS19Q8TE59 1207 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
RIF1-211ENST00000494333 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
RIF1-211ENST00000494333 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
RIF1-211ENST00000494333 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
RIF1-211ENST00000494333 EXOC5O00471 708 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 ADH1CP00326 375 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 SMPD1P17405 629 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
RIF1-211ENST00000494333 NFAT5O94916 1531 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 FYB1O15117 783 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 IP6K1Q92551 441 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 CEP126Q9P2H0 1117 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 MON2Q7Z3U7 1717 aa11.2□□□□□ -0.62
RIF1-211ENST00000494333 CCDC7Q96M83 1385 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 COL18A1P39060 1754 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
RIF1-211ENST00000494333 FSHRP23945 695 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 AMPHP49418 695 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
RIF1-211ENST00000494333 GLMNQ92990 594 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 LTV1Q96GA3 475 aaPredicted RBP11.19□□□□□ -0.62
RIF1-211ENST00000494333 WASF2Q9Y6W5 498 aa11.19□□□□□ -0.62
RIF1-211ENST00000494333 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
RIF1-211ENST00000494333 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
RIF1-211ENST00000494333 ESPNB1AK53 854 aa11.18□□□□□ -0.62
RIF1-211ENST00000494333 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
RIF1-211ENST00000494333 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
RIF1-211ENST00000494333 IL2RBP14784 551 aa11.17□□□□□ -0.62
RIF1-211ENST00000494333 NR5A1Q13285 461 aa11.17□□□□□ -0.62
RIF1-211ENST00000494333 OVOS2A0A0G2JMS6 1433 aa11.17□□□□□ -0.62
RIF1-211ENST00000494333 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
RIF1-211ENST00000494333 NRG2O14511 850 aaPredicted RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 NR3C2P08235 984 aa11.16□□□□□ -0.62
RIF1-211ENST00000494333 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 HOXC9P31274 260 aa11.16□□□□□ -0.62
RIF1-211ENST00000494333 NNTQ13423 1086 aa11.16□□□□□ -0.62
RIF1-211ENST00000494333 R3HDM1Q15032 1099 aaKnown RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 INTS6LQ5JSJ4 861 aaKnown RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
RIF1-211ENST00000494333 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
RIF1-211ENST00000494333 RAB15P59190 212 aa11.15□□□□□ -0.62
RIF1-211ENST00000494333 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 PLSCR1O15162 318 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 HPS1Q92902 700 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 RGPD1P0DJD0 1748 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 PARD3Q8TEW0 1356 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 ABCC6O95255 1503 aa11.14□□□□□ -0.63
RIF1-211ENST00000494333 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RIF1-211ENST00000494333 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
RIF1-211ENST00000494333 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
RIF1-211ENST00000494333 SLFNL1Q499Z3 407 aa11.13□□□□□ -0.63
RIF1-211ENST00000494333 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
RIF1-211ENST00000494333 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
RIF1-211ENST00000494333 USP54Q70EL1 1684 aa11.12□□□□□ -0.63
RIF1-211ENST00000494333 KCNQ2O43526 872 aa11.12□□□□□ -0.63
RIF1-211ENST00000494333 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms