RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-212ENST00000494067 GJA3Q9Y6H8 435 aa17.31■□□□□ 0.36
CTDSP1-212ENST00000494067 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 EPHX2P34913 555 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 GRAPQ13588 217 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 MYD88Q99836 296 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 PCNTO95613 3336 aa17.3■□□□□ 0.36
CTDSP1-212ENST00000494067 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 G2E3Q7L622 706 aa17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 TMC4Q7Z404 712 aa17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
CTDSP1-212ENST00000494067 PASKQ96RG2 1323 aa17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 ANP32CO43423 234 aa17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 SCNN1DP51172 638 aa17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 MPNDQ8N594 471 aa17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
CTDSP1-212ENST00000494067 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
CTDSP1-212ENST00000494067 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-212ENST00000494067 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-212ENST00000494067 CCDC30Q5VVM6 783 aa17.27■□□□□ 0.36
CTDSP1-212ENST00000494067 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 EPS15P42566 896 aa17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 METTL22Q9BUU2 404 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
CTDSP1-212ENST00000494067 IL16Q14005 1332 aa17.25■□□□□ 0.35
CTDSP1-212ENST00000494067 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
CTDSP1-212ENST00000494067 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-212ENST00000494067 MYH3P11055 1940 aa17.25■□□□□ 0.35
CTDSP1-212ENST00000494067 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 CXCL9Q07325 125 aa17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
CTDSP1-212ENST00000494067 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 TMEM88BA6NKF7 163 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 GPSM2P81274 684 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
CTDSP1-212ENST00000494067 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 TNIP1Q15025 636 aa17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 MKRN1Q9UHC7 482 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-212ENST00000494067 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
CTDSP1-212ENST00000494067 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-212ENST00000494067 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-212ENST00000494067 VAMP4O75379 141 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 RAD17O75943 681 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 EYA3Q99504 573 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
CTDSP1-212ENST00000494067 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
CTDSP1-212ENST00000494067 RTL9Q8NET4 1388 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 G3V3G9 751 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 PDE8AO60658 829 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 HSPA1AP0DMV8 641 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 HSPA1BP0DMV9 641 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 DBNDD1Q9H9R9 158 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms