RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 SLC16A10Q8TF71 515 aa14.16□□□□□ -0.14
MCF2L-231ENST00000494043 PDGFDQ9GZP0 370 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-231ENST00000494043 EXOC6BQ9Y2D4 811 aa14.16□□□□□ -0.14
MCF2L-231ENST00000494043 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
MCF2L-231ENST00000494043 NRXN2Q9P2S2 1712 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 CASZ1Q86V15 1759 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
MCF2L-231ENST00000494043 RTL9Q8NET4 1388 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
MCF2L-231ENST00000494043 ST5P78524 1137 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
MCF2L-231ENST00000494043 GREM2Q9H772 168 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 COPRSQ9NQ92 184 aa14.15□□□□□ -0.14
MCF2L-231ENST00000494043 PA2G4Q9UQ80 394 aaKnown RBP14.15□□□□□ -0.14
MCF2L-231ENST00000494043 NUCB1Q02818 461 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 PTPN12Q05209 780 aaKnown RBP14.14□□□□□ -0.15
MCF2L-231ENST00000494043 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
MCF2L-231ENST00000494043 SF3B3Q15393 1217 aaKnown RBP14.14□□□□□ -0.15
MCF2L-231ENST00000494043 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 CCDC152Q4G0S7 254 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 HSP90AB4PQ58FF6 505 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 CCDC24Q8N4L8 307 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 PARP3Q9Y6F1 533 aa14.14□□□□□ -0.15
MCF2L-231ENST00000494043 LRP5O75197 1615 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 ANKRD18BA2A2Z9 1011 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 ITGA6P23229 1130 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 R3HDM1Q15032 1099 aaKnown RBP14.13□□□□□ -0.15
MCF2L-231ENST00000494043 ANKRD45Q5TZF3 282 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 KLHDC4Q8TBB5 520 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 NLRP3Q96P20 1036 aa14.13□□□□□ -0.15
MCF2L-231ENST00000494043 APBB1O00213 710 aa14.12□□□□□ -0.15
MCF2L-231ENST00000494043 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
MCF2L-231ENST00000494043 SIL1Q9H173 461 aa14.12□□□□□ -0.15
MCF2L-231ENST00000494043 G3BP1Q13283 466 aaKnown RBP eCLIP14.11□□□□□ -0.15
MCF2L-231ENST00000494043 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
MCF2L-231ENST00000494043 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
MCF2L-231ENST00000494043 ERC1Q8IUD2 1116 aa14.11□□□□□ -0.15
MCF2L-231ENST00000494043 ZNF594Q96JF6 807 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-231ENST00000494043 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
MCF2L-231ENST00000494043 EYA2O00167 538 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 CIAO1O76071 339 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 KIF1BPQ96EK5 621 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 BRIP1Q9BX63 1249 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 SEC31BQ9NQW1 1179 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-231ENST00000494043 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
MCF2L-231ENST00000494043 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
MCF2L-231ENST00000494043 CRY2Q49AN0 593 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 ATG9AQ7Z3C6 839 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 SKAP1Q86WV1 359 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 CDC5LQ99459 802 aaKnown RBP14.09□□□□□ -0.15
MCF2L-231ENST00000494043 MTFR1LQ9H019 292 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 ANKRD31Q8N7Z5 1873 aa14.09□□□□□ -0.15
MCF2L-231ENST00000494043 COL4A1P02462 1669 aa14.08□□□□□ -0.16
MCF2L-231ENST00000494043 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-231ENST00000494043 PSDA5PKW4 1024 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-231ENST00000494043 SASH1O94885 1247 aa14.08□□□□□ -0.16
MCF2L-231ENST00000494043 ZBTB7AO95365 584 aa14.08□□□□□ -0.16
MCF2L-231ENST00000494043 PDE4AP27815 886 aa14.08□□□□□ -0.16
MCF2L-231ENST00000494043 IL15P40933 162 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-231ENST00000494043 LRRC24Q50LG9 513 aa14.08□□□□□ -0.16
MCF2L-231ENST00000494043 PUS3Q9BZE2 481 aaKnown RBP14.08□□□□□ -0.16
MCF2L-231ENST00000494043 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
MCF2L-231ENST00000494043 IGHMBP2P38935 993 aaKnown RBP14.07□□□□□ -0.16
MCF2L-231ENST00000494043 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
MCF2L-231ENST00000494043 DDX46Q7L014 1031 aaKnown RBP14.07□□□□□ -0.16
MCF2L-231ENST00000494043 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
MCF2L-231ENST00000494043 IL1RAPL2Q9NP60 686 aa14.07□□□□□ -0.16
MCF2L-231ENST00000494043 PDE6BP35913 854 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 RGS3P49796 1198 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 TFCP2Q12800 502 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 ANKRD18AQ8IVF6 992 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 CNNM1Q9NRU3 951 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 RIPOR2Q9Y4F9 1068 aa14.06□□□□□ -0.16
MCF2L-231ENST00000494043 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 POLD1P28340 1107 aa14.05□□□□□ -0.16
MCF2L-231ENST00000494043 HOXA10P31260 410 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 GRAPQ13588 217 aa14.05□□□□□ -0.16
MCF2L-231ENST00000494043 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-231ENST00000494043 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 SRGNP10124 158 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 RPS8P62241 208 aaKnown RBP14.04□□□□□ -0.16
MCF2L-231ENST00000494043 METTL24Q5JXM2 366 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 OTUD7AQ8TE49 926 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-231ENST00000494043 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
MCF2L-231ENST00000494043 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 GPR108Q9NPR9 543 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 BSDC1Q9NW68 430 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-231ENST00000494043 CEP126Q9P2H0 1117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms