RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 POM121Q96HA1 1249 aa8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 LNPKQ9C0E8 428 aa8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 UPF2Q9HAU5 1272 aaKnown RBP8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 MAP3K15Q6ZN16 1313 aa8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 TRAK2O60296 914 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 NBPF7P0C2Y1 421 aaPredicted RBP8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 SIK1P57059 783 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 TCIRG1Q13488 830 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 GPATCH3Q96I76 525 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 OSBPL3Q9H4L5 887 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 CCDC87Q9NVE4 849 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 A0A0G2JS52 829 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 SRGAP3O43295 1099 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 ISCA1Q9BUE6 129 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 ANKRD36CQ5JPF3 1778 aa8.2□□□□□ -1.1
FNDC3B-212ENST00000494000 H7C1W4 665 aa8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 PTMAP06454 111 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 ANP32AP39687 249 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 CWF19L2Q2TBE0 894 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 COL5A3P25940 1745 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 RABL6Q3YEC7 729 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 AK7Q96M32 723 aa8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 CNTNAP4Q9C0A0 1308 aa8.19□□□□□ -1.1
FNDC3B-212ENST00000494000 PNMA6EA0A0J9YXQ4 647 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 ANKRD62A6NC57 917 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 PAX3P23760 479 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 RBM26Q5T8P6 1007 aaKnown RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 TTLL7Q6ZT98 887 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 ACSBG1Q96GR2 724 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 PPFIA4O75335 1185 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 FAM196AQ6ZSG2 479 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 ZNF652Q9Y2D9 606 aa8.18□□□□□ -1.1
FNDC3B-212ENST00000494000 BTAF1O14981 1849 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 G3BP1Q13283 466 aaKnown RBP eCLIP8.17□□□□□ -1.16e-9■□□□□ 9.2
FNDC3B-212ENST00000494000 PARP10Q53GL7 1025 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 SBF2Q86WG5 1849 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 DDRGK1Q96HY6 314 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 SUCLG2Q96I99 432 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 COPRSQ9NQ92 184 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 STAP2Q9UGK3 403 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 CRKLP46109 303 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 CASP7P55210 303 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 RBM6P78332 1123 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 TTC22Q5TAA0 569 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 CLEC4GQ6UXB4 293 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 BICC1Q9H694 974 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 PNMA2Q9UL42 364 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 LY75O60449 1722 aa8.17□□□□□ -1.1
FNDC3B-212ENST00000494000 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 CLASRPQ8N2M8 674 aaKnown RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 ZBTB38Q8NAP3 1195 aaPredicted RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 RHPN1Q8TCX5 695 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 ZBTB1Q9Y2K1 713 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 TTC41PQ6P2S7 1318 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 SEMA3EO15041 775 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 DNAJC14Q6Y2X3 702 aaPredicted RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 UBE3BQ7Z3V4 1068 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 EXOC6BQ9Y2D4 811 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 NUP98P52948 1817 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 ERC2O15083 957 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 CDC45O75419 566 aa8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 PIP4K2AP48426 406 aaPredicted RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 ZNF830Q96NB3 372 aaPredicted RBP8.16□□□□□ -1.1
FNDC3B-212ENST00000494000 SALL3Q9BXA9 1300 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 MX1P20591 662 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 PDE1AP54750 535 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 CACNB1Q02641 598 aaPredicted RBP8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 KRT27Q7Z3Y8 459 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 KAZALD1Q96I82 304 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 SH3BP1Q9Y3L3 701 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 BCORQ6W2J9 1755 aa8.15□□□□□ -1.1
FNDC3B-212ENST00000494000 KCNQ2O43526 872 aa8.15□□□□□ -1.11
FNDC3B-212ENST00000494000 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.11
FNDC3B-212ENST00000494000 SKAP1Q86WV1 359 aa8.15□□□□□ -1.11
FNDC3B-212ENST00000494000 ZNF34Q8IZ26 560 aa8.15□□□□□ -1.11
FNDC3B-212ENST00000494000 EPB41L2O43491 1005 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms