RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 DPP8Q6V1X1 898 aaPredicted RBP10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 DDX46Q7L014 1031 aaKnown RBP10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 SP8Q8IXZ3 490 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 SH3TC1Q8TE82 1336 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 WDR33Q9C0J8 1336 aaKnown RBP10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 ADARB2Q9NS39 739 aaKnown RBP10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 GPRC5DQ9NZD1 345 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 TRMT112Q9UI30 125 aaKnown RBP10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 ZNRF3Q9ULT6 936 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 MYH3P11055 1940 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 CDHR2Q9BYE9 1310 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 CHL1O00533 1208 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 HCLS1P14317 486 aaPredicted RBP10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 MAP2K1Q02750 393 aaPredicted RBP10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 CXCL9Q07325 125 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 KIAA2012Q0VF49 1180 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 GRAPQ13588 217 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 MPNDQ8N594 471 aa10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 GRAPLQ8TC17 118 aaPredicted RBP10.19□□□□□ -0.78
SEMA3F-209ENST00000493743 HOXB7P09629 217 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 ECE1P42892 770 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 LBX1P52954 281 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 FMR1Q06787 632 aaKnown RBP eCLIP10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 KRT24Q2M2I5 525 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 CIAPIN1Q6FI81 312 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 TMC4Q7Z404 712 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 PLBD2Q8NHP8 589 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 RUNDC1Q96C34 613 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 LAS1LQ9Y4W2 734 aaKnown RBP10.18□□□□□ -0.78
SEMA3F-209ENST00000493743 SPEF2Q9C093 1822 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 TRAF5O00463 557 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 HSPA8P11142 646 aaKnown RBP10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 GMPSP49915 693 aaPredicted RBP10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 TNIP1Q15025 636 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 PAXIP1Q6ZW49 1069 aaPredicted RBP10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 BCL2L13Q9BXK5 485 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 COL4A1P02462 1669 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 SCN9AQ15858 1988 aa10.17□□□□□ -0.78
SEMA3F-209ENST00000493743 RAD17O75943 681 aa10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 DDX10Q13206 875 aaKnown RBP10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 CST9Q5W186 159 aa10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 ISCA1Q9BUE6 129 aa10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
SEMA3F-209ENST00000493743 CASP8AP2Q9UKL3 1982 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 GRM1Q13255 1194 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 SF3B3Q15393 1217 aaKnown RBP10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 CYP4F22Q6NT55 531 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 ZC3H15Q8WU90 426 aaKnown RBP10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 GPR101Q96P66 508 aaPredicted RBP10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 PGAP2Q9UHJ9 254 aa10.15□□□□□ -0.78
SEMA3F-209ENST00000493743 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 YDJCA8MPS7 323 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 CELF2O95319 508 aaKnown RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 MAP2K2P36507 400 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 WASHC4Q2M389 1173 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 CELF1Q92879 486 aaKnown RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 ZNF428Q96B54 188 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 FAM89AQ96GI7 184 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 GLIS2Q9BZE0 524 aaPredicted RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 CNOT7Q9UIV1 285 aaKnown RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 NSFL1CQ9UNZ2 370 aaKnown RBP10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
SEMA3F-209ENST00000493743 H7C1D1 291 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 DUSP27Q5VZP5 1158 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 CDC37L1Q7L3B6 337 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 SAPCD2Q86UD0 394 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 TRPM4Q8TD43 1214 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 DPF2Q92785 391 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 MBIPQ9NS73 344 aa10.13□□□□□ -0.79
SEMA3F-209ENST00000493743 C6orf229H3BNL8 230 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 GOLGA2Q08379 1002 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 EYA3Q99504 573 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 ZNF408Q9H9D4 720 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 DBNDD1Q9H9R9 158 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
SEMA3F-209ENST00000493743 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms