RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 NOLC1Q14978 699 aaKnown RBP eCLIP23.01■■□□□ 1.27
RNF40-203ENST00000493683 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 ACTN2P35609 894 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 TIGD1Q96MW7 591 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 STMN4Q9H169 189 aaPredicted RBP23.01■■□□□ 1.27
RNF40-203ENST00000493683 TSPY2A6NKD2 308 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 OPA1O60313 960 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 GSTO1P78417 241 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 TBC1D5Q92609 795 aa23.01■■□□□ 1.27
RNF40-203ENST00000493683 LDHAL6AQ6ZMR3 332 aa23■■□□□ 1.27
RNF40-203ENST00000493683 MICU3Q86XE3 530 aa23■■□□□ 1.27
RNF40-203ENST00000493683 DHX37Q8IY37 1157 aaKnown RBP23■■□□□ 1.27
RNF40-203ENST00000493683 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
RNF40-203ENST00000493683 HOMER2Q9NSB8 354 aa23■■□□□ 1.27
RNF40-203ENST00000493683 TUBBP07437 444 aa23■■□□□ 1.27
RNF40-203ENST00000493683 SELENOOQ9BVL4 669 aa23■■□□□ 1.27
RNF40-203ENST00000493683 TBCAO75347 108 aaKnown RBP23■■□□□ 1.27
RNF40-203ENST00000493683 SKILP12757 684 aa23■■□□□ 1.27
RNF40-203ENST00000493683 RPGRQ92834 1020 aaKnown RBP23■■□□□ 1.27
RNF40-203ENST00000493683 RBM27Q9P2N5 1060 aaKnown RBP23■■□□□ 1.27
RNF40-203ENST00000493683 GNAQP50148 359 aa23■■□□□ 1.27
RNF40-203ENST00000493683 PRC1O43663 620 aa23■■□□□ 1.27
RNF40-203ENST00000493683 RASAL2Q9UJF2 1139 aa23■■□□□ 1.27
RNF40-203ENST00000493683 PRPF4BQ13523 1007 aaKnown RBP22.99■■□□□ 1.27
RNF40-203ENST00000493683 CRNKL1Q9BZJ0 848 aaKnown RBP22.99■■□□□ 1.27
RNF40-203ENST00000493683 TTC12Q9H892 705 aaPredicted RBP22.99■■□□□ 1.27
RNF40-203ENST00000493683 IGHDP01880 384 aa22.99■■□□□ 1.27
RNF40-203ENST00000493683 SPATA24Q86W54 205 aa22.99■■□□□ 1.27
RNF40-203ENST00000493683 HLA-DOAP06340 250 aa22.99■■□□□ 1.27
RNF40-203ENST00000493683 TSNARE1Q96NA8 513 aa22.99■■□□□ 1.27
RNF40-203ENST00000493683 IKBKGQ9Y6K9 419 aa22.99■■□□□ 1.27
RNF40-203ENST00000493683 HSPA4P34932 840 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 WTAPQ15007 396 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 CCDC97Q96F63 343 aaPredicted RBP22.98■■□□□ 1.27
RNF40-203ENST00000493683 ALDH1L1O75891 902 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 SREK1Q8WXA9 508 aaKnown RBP22.98■■□□□ 1.27
RNF40-203ENST00000493683 SYCP3Q8IZU3 236 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 ZBTB43O43298 467 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 SDSP20132 328 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 GIMAP6Q6P9H5 292 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 ESYT1Q9BSJ8 1104 aa22.98■■□□□ 1.27
RNF40-203ENST00000493683 ANO6Q4KMQ2 910 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 RRAGBQ5VZM2 374 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 CCDC174Q6PII3 467 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 ZKSCAN5Q9Y2L8 839 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 KLF18A0A0U1RQI7 1052 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 KRT83P78385 493 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 BRF1Q92994 677 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 TACC1O75410 805 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
RNF40-203ENST00000493683 ANKRD44Q8N8A2 993 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 CCDC77Q9BR77 488 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 CABP5Q9NP86 173 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 CUL7Q14999 1698 aa22.97■■□□□ 1.27
RNF40-203ENST00000493683 PSMA7O14818 248 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 LMBR1Q8WVP7 490 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 FERP16591 822 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 TMX1Q9H3N1 280 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 C14orf93Q9H972 538 aaKnown RBP22.96■■□□□ 1.27
RNF40-203ENST00000493683 PI4KAP2A4QPH2 592 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 F13A1P00488 732 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 PI4KAP1Q8N8J0 262 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 ESR2Q92731 530 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 SPAG5Q96R06 1193 aa22.96■■□□□ 1.27
RNF40-203ENST00000493683 PDE1AP54750 535 aa22.95■■□□□ 1.27
RNF40-203ENST00000493683 TICAM2Q86XR7 235 aa22.95■■□□□ 1.26
RNF40-203ENST00000493683 USHBP1Q8N6Y0 703 aa22.95■■□□□ 1.26
RNF40-203ENST00000493683 SLU7O95391 586 aaKnown RBP22.95■■□□□ 1.26
RNF40-203ENST00000493683 ALG1Q9BT22 464 aa22.95■■□□□ 1.26
RNF40-203ENST00000493683 PODXL2Q9NZ53 605 aa22.95■■□□□ 1.26
RNF40-203ENST00000493683 ADGRF5Q8IZF2 1346 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 MYO1BO43795 1136 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 STAT6P42226 847 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 USP48Q86UV5 1035 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 MCMDC2Q4G0Z9 681 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 ZGPATQ8N5A5 531 aaKnown RBP22.94■■□□□ 1.26
RNF40-203ENST00000493683 TTC14Q96N46 770 aa22.94■■□□□ 1.26
RNF40-203ENST00000493683 CCDC186Q7Z3E2 898 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 SKAP1Q86WV1 359 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 GOLGA1Q92805 767 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 ADGRL1O94910 1474 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 MPHOSPH6Q99547 160 aaKnown RBP22.93■■□□□ 1.26
RNF40-203ENST00000493683 TTC41PQ6P2S7 1318 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 CTAGE9A4FU28 777 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 LARP6Q9BRS8 491 aaKnown RBP22.93■■□□□ 1.26
RNF40-203ENST00000493683 DNAI1Q9UI46 699 aa22.93■■□□□ 1.26
RNF40-203ENST00000493683 RTN1Q16799 776 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 LRRC45Q96CN5 670 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 PANK2Q9BZ23 570 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 RBM8AQ9Y5S9 174 aaKnown RBP22.92■■□□□ 1.26
RNF40-203ENST00000493683 CD109Q6YHK3 1445 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 CALM1P0DP23 149 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 CALM2P0DP24 149 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 CALM3P0DP25 149 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 ZBTB3Q9H5J0 574 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 CNPY2Q9Y2B0 182 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 KRT86O43790 486 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms