RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 OFD1O75665 1012 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 CAMTA2O94983 1202 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 PCCAP05165 728 aaPredicted RBP8.82□□□□□ -1
SMARCE1-211ENST00000493660 MRE11P49959 708 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 SUCLG2Q96I99 432 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 CASZ1Q86V15 1759 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
SMARCE1-211ENST00000493660 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 RABL6Q3YEC7 729 aaPredicted RBP8.82□□□□□ -1
SMARCE1-211ENST00000493660 HSP90AB4PQ58FF6 505 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 ZNF34Q8IZ26 560 aa8.82□□□□□ -1
SMARCE1-211ENST00000493660 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 RAB11FIP3O75154 756 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 HLFQ16534 295 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 PARP10Q53GL7 1025 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 DNTTIP2Q5QJE6 756 aaKnown RBP8.81□□□□□ -1
SMARCE1-211ENST00000493660 CHD1LQ86WJ1 897 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 KAZALD1Q96I82 304 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 CCDC94Q9BW85 323 aaPredicted RBP8.81□□□□□ -1
SMARCE1-211ENST00000493660 PLA2G12BQ9BX93 195 aa8.81□□□□□ -1
SMARCE1-211ENST00000493660 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
SMARCE1-211ENST00000493660 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
SMARCE1-211ENST00000493660 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 NLRP10Q86W26 655 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 ZBTB38Q8NAP3 1195 aaPredicted RBP8.8□□□□□ -1
SMARCE1-211ENST00000493660 AK7Q96M32 723 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 BICC1Q9H694 974 aaKnown RBP8.8□□□□□ -1
SMARCE1-211ENST00000493660 NARFQ9UHQ1 456 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 GNPATO15228 680 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 SRGAP3O43295 1099 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 CNPY4Q8N129 248 aa8.8□□□□□ -1
SMARCE1-211ENST00000493660 DYNC1I1O14576 645 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 TXNRD1Q16881 649 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 ANKRD45Q5TZF3 282 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 ILDR2Q71H61 639 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 PRDM10Q9NQV6 1147 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 LRRC4BQ9NT99 713 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 SSFA2P28290 1259 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 FOXO4P98177 505 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 ZNF622Q969S3 477 aaKnown RBP eCLIP8.79□□□□□ -1
SMARCE1-211ENST00000493660 FAM13BQ9NYF5 915 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 UBN2Q6ZU65 1347 aa8.79□□□□□ -1
SMARCE1-211ENST00000493660 APBA3O96018 575 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 PTMSP20962 102 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 KCNQ4P56696 695 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 LRRCC1Q9C099 1032 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 USP42Q9H9J4 1324 aaKnown RBP8.78□□□□□ -1
SMARCE1-211ENST00000493660 LRP5O75197 1615 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 ZPR1O75312 459 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 EPHA10Q5JZY3 1008 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 DNAJC2Q99543 621 aaKnown RBP8.78□□□□□ -1
SMARCE1-211ENST00000493660 LNPKQ9C0E8 428 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 COPRSQ9NQ92 184 aa8.78□□□□□ -1
SMARCE1-211ENST00000493660 SURF6O75683 361 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 PTMAP06454 111 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 GPTP24298 496 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 UTP14AQ9BVJ6 771 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 TRMT112Q9UI30 125 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 PDE8AO60658 829 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 CSF1RP07333 972 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 RFC4P35249 363 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 RFX5P48382 616 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 PROM2Q8N271 834 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 NIP7Q9Y221 180 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
SMARCE1-211ENST00000493660 RTL9Q8NET4 1388 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 RIC1Q4ADV7 1423 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 NTSR2O95665 410 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 SUSD4Q5VX71 490 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 LMBR1LQ6UX01 489 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 NYXQ9GZU5 481 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 KCNG1Q9UIX4 513 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 AOX1Q06278 1338 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 AK9Q5TCS8 1911 aa8.76□□□□□ -1.01
SMARCE1-211ENST00000493660 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 CTSWP56202 376 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 G3BP1Q13283 466 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 USPL1Q5W0Q7 1092 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 RHPN1Q8TCX5 695 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 AKT1S1Q96B36 256 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 FAM89AQ96GI7 184 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 PANK2Q9BZ23 570 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 YY1AP1Q9H869 796 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 NRXN2Q9P2S2 1712 aa8.75□□□□□ -1.01
SMARCE1-211ENST00000493660 PTPN12Q05209 780 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms