RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
CLIP4-212ENST00000493551 TDRD9Q8NDG6 1382 aaKnown RBP8.05□□□□□ -1.12
CLIP4-212ENST00000493551 RAD54L2Q9Y4B4 1467 aa8.05□□□□□ -1.12
CLIP4-212ENST00000493551 DZIP1LQ8IYY4 767 aaKnown RBP8.04□□□□□ -1.12
CLIP4-212ENST00000493551 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
CLIP4-212ENST00000493551 KRTAP4-7Q9BYR0 210 aa8.04□□□□□ -1.12
CLIP4-212ENST00000493551 DNMBPQ6XZF7 1577 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 USP17L5A8MUK1 530 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 CPB1P15086 417 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 BRPF1P55201 1214 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-212ENST00000493551 IER5Q5VY09 327 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 AKTIPQ9H8T0 292 aa8.03□□□□□ -1.12
CLIP4-212ENST00000493551 SNAPC4Q5SXM2 1469 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 M0R2N6 131 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 TAL1P17542 331 aaPredicted RBP8.02□□□□□ -1.13
CLIP4-212ENST00000493551 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 CCDC102BQ68D86 513 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 DEPDC4Q8N2C3 294 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 TTC9Q92623 222 aa8.02□□□□□ -1.13
CLIP4-212ENST00000493551 TARBP1Q13395 1621 aaKnown RBP8.02□□□□□ -1.13
CLIP4-212ENST00000493551 PPP1R12BO60237 982 aaPredicted RBP8.01□□□□□ -1.13
CLIP4-212ENST00000493551 PTCD1O75127 700 aaKnown RBP8.01□□□□□ -1.13
CLIP4-212ENST00000493551 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
CLIP4-212ENST00000493551 ELMSAN1Q6PJG2 1045 aa8.01□□□□□ -1.13
CLIP4-212ENST00000493551 KIAA1024Q9UPX6 916 aa8.01□□□□□ -1.13
CLIP4-212ENST00000493551 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
CLIP4-212ENST00000493551 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 KIAA1324LA8MWY0 1029 aaPredicted RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 DLL1O00548 723 aa8□□□□□ -1.13
CLIP4-212ENST00000493551 GSC2O15499 205 aa8□□□□□ -1.13
CLIP4-212ENST00000493551 DEAF1O75398 565 aaPredicted RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 MAP3K6O95382 1288 aa8□□□□□ -1.13
CLIP4-212ENST00000493551 GP2P55259 537 aaKnown RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 ALG2Q9H553 416 aa8□□□□□ -1.13
CLIP4-212ENST00000493551 OAS3Q9Y6K5 1087 aaKnown RBP8□□□□□ -1.13
CLIP4-212ENST00000493551 ZBTB7BO15156 539 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-212ENST00000493551 EPB42P16452 691 aa7.99□□□□□ -1.13
CLIP4-212ENST00000493551 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
CLIP4-212ENST00000493551 STAG2Q8N3U4 1231 aa7.99□□□□□ -1.13
CLIP4-212ENST00000493551 TRPM4Q8TD43 1214 aa7.99□□□□□ -1.13
CLIP4-212ENST00000493551 ARID1BQ8NFD5 2236 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-212ENST00000493551 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
CLIP4-212ENST00000493551 PLAURQ03405 335 aa7.98□□□□□ -1.13
CLIP4-212ENST00000493551 CLASP1Q7Z460 1538 aa7.98□□□□□ -1.13
CLIP4-212ENST00000493551 SOGA1O94964 1423 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 C21orf2O43822 256 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 CLDN10P78369 228 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 GPLD1P80108 840 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 FZD5Q13467 585 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 DHX32Q7L7V1 743 aaKnown RBP7.97□□□□□ -1.13
CLIP4-212ENST00000493551 C2orf49Q9BVC5 232 aaPredicted RBP7.97□□□□□ -1.13
CLIP4-212ENST00000493551 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
CLIP4-212ENST00000493551 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
CLIP4-212ENST00000493551 ALX3O95076 343 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 IGLV1-40P01703 118 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 LARGE2Q8N3Y3 721 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 TSEN2Q8NCE0 465 aaKnown RBP7.96□□□□□ -1.14
CLIP4-212ENST00000493551 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 DCAF11Q8TEB1 546 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 RAXQ9Y2V3 346 aa7.96□□□□□ -1.14
CLIP4-212ENST00000493551 GAPVD1Q14C86 1478 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 MED26O95402 600 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 RTN1Q16799 776 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 Q6ZS46 218 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 BCANQ96GW7 911 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 NGLY1Q96IV0 654 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
CLIP4-212ENST00000493551 SYNJ1O43426 1573 aa7.95□□□□□ -1.14
CLIP4-212ENST00000493551 PALM3A6NDB9 673 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-212ENST00000493551 TGFB1P01137 390 aa7.94□□□□□ -1.14
CLIP4-212ENST00000493551 ARID4AP29374 1257 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-212ENST00000493551 SIX5Q8N196 739 aa7.94□□□□□ -1.14
CLIP4-212ENST00000493551 SMG9Q9H0W8 520 aaKnown RBP7.94□□□□□ -1.14
CLIP4-212ENST00000493551 C11orf16Q9NQ32 467 aa7.94□□□□□ -1.14
CLIP4-212ENST00000493551 ZFATQ9P243 1243 aa7.94□□□□□ -1.14
CLIP4-212ENST00000493551 DMGDHQ9UI17 866 aaKnown RBP7.94□□□□□ -1.14
CLIP4-212ENST00000493551 RBM19Q9Y4C8 960 aaKnown RBP7.94□□□□□ -1.14
CLIP4-212ENST00000493551 ATAD2Q6PL18 1390 aa7.94□□□□□ -1.14
CLIP4-212ENST00000493551 ERCC6L2Q5T890 1561 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 RARAP10276 462 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
CLIP4-212ENST00000493551 MLLT1Q03111 559 aaPredicted RBP7.93□□□□□ -1.14
CLIP4-212ENST00000493551 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 KRT25Q7Z3Z0 450 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 OGFOD1Q8N543 542 aa7.93□□□□□ -1.14
CLIP4-212ENST00000493551 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
CLIP4-212ENST00000493551 STOML1Q9UBI4 398 aa7.92□□□□□ -1.14
CLIP4-212ENST00000493551 BCS1LQ9Y276 419 aa7.92□□□□□ -1.14
CLIP4-212ENST00000493551 GLB1P16278 677 aa7.91□□□□□ -1.14
CLIP4-212ENST00000493551 EIF2AK2P19525 551 aaKnown RBP7.91□□□□□ -1.14
CLIP4-212ENST00000493551 INPP5BP32019 993 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms