RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 PDE8AO60658 829 aa22.97■■□□□ 1.27
GTF3C2-212ENST00000493511 IARSP41252 1262 aaKnown RBP22.97■■□□□ 1.27
GTF3C2-212ENST00000493511 CWF19L2Q2TBE0 894 aaKnown RBP22.97■■□□□ 1.27
GTF3C2-212ENST00000493511 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
GTF3C2-212ENST00000493511 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
GTF3C2-212ENST00000493511 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
GTF3C2-212ENST00000493511 CEP350Q5VT06 3117 aa22.96■■□□□ 1.27
GTF3C2-212ENST00000493511 CCDC152Q4G0S7 254 aa22.95■■□□□ 1.26
GTF3C2-212ENST00000493511 C16orf71Q8IYS4 520 aaPredicted RBP22.95■■□□□ 1.26
GTF3C2-212ENST00000493511 JDP2Q8WYK2 163 aa22.95■■□□□ 1.26
GTF3C2-212ENST00000493511 TOMM70O94826 608 aa22.94■■□□□ 1.26
GTF3C2-212ENST00000493511 SUPT20HQ8NEM7 779 aa22.94■■□□□ 1.26
GTF3C2-212ENST00000493511 CDCA7LQ96GN5 454 aa22.94■■□□□ 1.26
GTF3C2-212ENST00000493511 RRAGCQ9HB90 399 aa22.94■■□□□ 1.26
GTF3C2-212ENST00000493511 GCKRQ14397 625 aa22.93■■□□□ 1.26
GTF3C2-212ENST00000493511 DPP8Q6V1X1 898 aaPredicted RBP22.93■■□□□ 1.26
GTF3C2-212ENST00000493511 JARID2Q92833 1246 aaPredicted RBP22.93■■□□□ 1.26
GTF3C2-212ENST00000493511 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
GTF3C2-212ENST00000493511 UBE3BQ7Z3V4 1068 aa22.92■■□□□ 1.26
GTF3C2-212ENST00000493511 MPNDQ8N594 471 aa22.92■■□□□ 1.26
GTF3C2-212ENST00000493511 CELF1Q92879 486 aaKnown RBP22.92■■□□□ 1.26
GTF3C2-212ENST00000493511 VPS33BQ9H267 617 aa22.92■■□□□ 1.26
GTF3C2-212ENST00000493511 H7C1W4 665 aa22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 TRMT2AQ8IZ69 625 aaKnown RBP22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 LARGE2Q8N3Y3 721 aa22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
GTF3C2-212ENST00000493511 TAF1P21675 1872 aa22.9■■□□□ 1.26
GTF3C2-212ENST00000493511 F6X3S4 739 aa22.9■■□□□ 1.26
GTF3C2-212ENST00000493511 CTSWP56202 376 aa22.9■■□□□ 1.26
GTF3C2-212ENST00000493511 FZD9O00144 591 aa22.89■■□□□ 1.25
GTF3C2-212ENST00000493511 PPIP5K2O43314 1243 aa22.89■■□□□ 1.25
GTF3C2-212ENST00000493511 CT47B1P0C2W7 299 aaPredicted RBP22.89■■□□□ 1.25
GTF3C2-212ENST00000493511 DDNO94850 711 aaPredicted RBP22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 BEND3Q5T5X7 828 aa22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 MRPL50Q8N5N7 158 aaKnown RBP22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 RBM46Q8TBY0 533 aaKnown RBP22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 SEC31BQ9NQW1 1179 aa22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 LRRC37AA6NMS7 1700 aa22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 WDR90Q96KV7 1748 aa22.88■■□□□ 1.25
GTF3C2-212ENST00000493511 ALDH1L2Q3SY69 923 aa22.87■■□□□ 1.25
GTF3C2-212ENST00000493511 NIM1KQ8IY84 436 aa22.87■■□□□ 1.25
GTF3C2-212ENST00000493511 SSH1Q8WYL5 1049 aa22.87■■□□□ 1.25
GTF3C2-212ENST00000493511 CCDC85AQ96PX6 553 aaPredicted RBP22.87■■□□□ 1.25
GTF3C2-212ENST00000493511 CDC5LQ99459 802 aaKnown RBP22.87■■□□□ 1.25
GTF3C2-212ENST00000493511 MYH3P11055 1940 aa22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 PTPRCP08575 1304 aa22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 EIF6P56537 245 aaKnown RBP22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 AOC3Q16853 763 aa22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 TTLL11Q8NHH1 800 aa22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 PLA2G12BQ9BX93 195 aa22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 NSFL1CQ9UNZ2 370 aaKnown RBP22.86■■□□□ 1.25
GTF3C2-212ENST00000493511 ZNF541Q9H0D2 1346 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 IQCA1LA6NCM1 817 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 SLC4A10Q6U841 1118 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 ANKRD18AQ8IVF6 992 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 GPC2Q8N158 579 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 L3MBTL3Q96JM7 780 aaPredicted RBP22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 RTL9Q8NET4 1388 aa22.85■■□□□ 1.25
GTF3C2-212ENST00000493511 ALDH1L1O75891 902 aa22.84■■□□□ 1.25
GTF3C2-212ENST00000493511 CASP7P55210 303 aa22.84■■□□□ 1.25
GTF3C2-212ENST00000493511 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
GTF3C2-212ENST00000493511 SRCIN1Q9C0H9 1055 aa22.84■■□□□ 1.25
GTF3C2-212ENST00000493511 POTECB2RU33 542 aa22.83■■□□□ 1.25
GTF3C2-212ENST00000493511 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
GTF3C2-212ENST00000493511 GREM2Q9H772 168 aa22.83■■□□□ 1.25
GTF3C2-212ENST00000493511 SMC4Q9NTJ3 1288 aa22.83■■□□□ 1.25
GTF3C2-212ENST00000493511 COL4A5P29400 1685 aa22.83■■□□□ 1.24
GTF3C2-212ENST00000493511 COL4A1P02462 1669 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 GRM8O00222 908 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 GPSM2P81274 684 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 FSTL1Q12841 308 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 BCL2L13Q9BXK5 485 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 C9orf78Q9NZ63 289 aaPredicted RBP22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 ANKIB1Q9P2G1 1089 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 ZNRF3Q9ULT6 936 aa22.82■■□□□ 1.24
GTF3C2-212ENST00000493511 C6orf229H3BNL8 230 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 HSPA6P17066 643 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 WASHC4Q2M389 1173 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 SMC1BQ8NDV3 1235 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 EYA3Q99504 573 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 PODXL2Q9NZ53 605 aa22.81■■□□□ 1.24
GTF3C2-212ENST00000493511 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
GTF3C2-212ENST00000493511 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
GTF3C2-212ENST00000493511 GJA3Q9Y6H8 435 aa22.8■■□□□ 1.24
GTF3C2-212ENST00000493511 SCN4AP35499 1836 aa22.8■■□□□ 1.24
GTF3C2-212ENST00000493511 CSF1RP07333 972 aa22.79■■□□□ 1.24
GTF3C2-212ENST00000493511 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
GTF3C2-212ENST00000493511 TBC1D16Q8TBP0 767 aa22.79■■□□□ 1.24
GTF3C2-212ENST00000493511 POLLQ9UGP5 575 aa22.79■■□□□ 1.24
GTF3C2-212ENST00000493511 HACL1Q9UJ83 578 aa22.79■■□□□ 1.24
GTF3C2-212ENST00000493511 ITGA6P23229 1130 aa22.78■■□□□ 1.24
GTF3C2-212ENST00000493511 FAM161AQ3B820 660 aa22.78■■□□□ 1.24
GTF3C2-212ENST00000493511 GGA1Q9UJY5 639 aa22.78■■□□□ 1.24
GTF3C2-212ENST00000493511 XDHP47989 1333 aa22.78■■□□□ 1.24
GTF3C2-212ENST00000493511 UFL1O94874 794 aa22.77■■□□□ 1.24
GTF3C2-212ENST00000493511 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
GTF3C2-212ENST00000493511 LTBP1Q14766 1721 aa22.77■■□□□ 1.23
GTF3C2-212ENST00000493511 LMOD1P29536 600 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms