RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 TRPM4Q8TD43 1214 aa8.16□□□□□ -1.1
SYCP1-208ENST00000493377 FAM46AQ96IP4 442 aaKnown RBP8.16□□□□□ -1.1
SYCP1-208ENST00000493377 FAM83CQ9BQN1 747 aa8.16□□□□□ -1.1
SYCP1-208ENST00000493377 NFXL1Q6ZNB6 911 aa8.15□□□□□ -1.1
SYCP1-208ENST00000493377 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
SYCP1-208ENST00000493377 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
SYCP1-208ENST00000493377 EIF4G2P78344 907 aaKnown RBP eCLIP8.14□□□□□ -1.11
SYCP1-208ENST00000493377 COL19A1Q14993 1142 aa8.14□□□□□ -1.11
SYCP1-208ENST00000493377 SH3PXD2AQ5TCZ1 1133 aa8.14□□□□□ -1.11
SYCP1-208ENST00000493377 BTLAQ7Z6A9 289 aa8.14□□□□□ -1.11
SYCP1-208ENST00000493377 KSR1Q8IVT5 923 aa8.14□□□□□ -1.11
SYCP1-208ENST00000493377 AGBL5Q8NDL9 886 aa8.14□□□□□ -1.11
SYCP1-208ENST00000493377 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
SYCP1-208ENST00000493377 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
SYCP1-208ENST00000493377 EPHA4P54764 986 aa8.13□□□□□ -1.11
SYCP1-208ENST00000493377 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
SYCP1-208ENST00000493377 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
SYCP1-208ENST00000493377 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
SYCP1-208ENST00000493377 GPLD1P80108 840 aa8.12□□□□□ -1.11
SYCP1-208ENST00000493377 FAM20CQ8IXL6 584 aa8.12□□□□□ -1.11
SYCP1-208ENST00000493377 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SYCP1-208ENST00000493377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
SYCP1-208ENST00000493377 FOSL1P15407 271 aa8.11□□□□□ -1.11
SYCP1-208ENST00000493377 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
SYCP1-208ENST00000493377 CPSF6Q16630 551 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYCP1-208ENST00000493377 HIF1AQ16665 826 aa8.11□□□□□ -1.11
SYCP1-208ENST00000493377 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
SYCP1-208ENST00000493377 LEMD3Q9Y2U8 911 aa8.11□□□□□ -1.11
SYCP1-208ENST00000493377 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
SYCP1-208ENST00000493377 SLC38A3Q99624 504 aa8.1□□□□□ -1.11
SYCP1-208ENST00000493377 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
SYCP1-208ENST00000493377 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
SYCP1-208ENST00000493377 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
SYCP1-208ENST00000493377 BIN1O00499 593 aa8.09□□□□□ -1.11
SYCP1-208ENST00000493377 POTEAQ6S8J7 498 aa8.09□□□□□ -1.11
SYCP1-208ENST00000493377 TBCELQ5QJ74 424 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 IL22RA1Q8N6P7 574 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 RAPGEFL1Q9UHV5 662 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
SYCP1-208ENST00000493377 APBB1O00213 710 aa8.07□□□□□ -1.12
SYCP1-208ENST00000493377 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
SYCP1-208ENST00000493377 PSMA6P60900 246 aaKnown RBP8.07□□□□□ -1.12
SYCP1-208ENST00000493377 ACAD11Q709F0 780 aa8.07□□□□□ -1.12
SYCP1-208ENST00000493377 BHLHE22Q8NFJ8 381 aaPredicted RBP8.07□□□□□ -1.12
SYCP1-208ENST00000493377 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
SYCP1-208ENST00000493377 ATG3Q9NT62 314 aa8.07□□□□□ -1.12
SYCP1-208ENST00000493377 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
SYCP1-208ENST00000493377 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
SYCP1-208ENST00000493377 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.06□□□□□ -1.12
SYCP1-208ENST00000493377 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
SYCP1-208ENST00000493377 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
SYCP1-208ENST00000493377 CARMIL2Q6F5E8 1435 aa8.05□□□□□ -1.12
SYCP1-208ENST00000493377 WISP1O95388 367 aa8.05□□□□□ -1.12
SYCP1-208ENST00000493377 EIF2AK2P19525 551 aaKnown RBP8.05□□□□□ -1.12
SYCP1-208ENST00000493377 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYCP1-208ENST00000493377 BSDC1Q9NW68 430 aaPredicted RBP8.05□□□□□ -1.12
SYCP1-208ENST00000493377 HCN4Q9Y3Q4 1203 aa8.05□□□□□ -1.12
SYCP1-208ENST00000493377 BMP3P12645 472 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 IER5Q5VY09 327 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 FLCNQ8NFG4 579 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 MFSD14AQ96MC6 490 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 TOX2Q96NM4 488 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 HIF3AQ9Y2N7 669 aa8.04□□□□□ -1.12
SYCP1-208ENST00000493377 NRLP54845 237 aa8.03□□□□□ -1.12
SYCP1-208ENST00000493377 GDF6Q6KF10 455 aaPredicted RBP8.03□□□□□ -1.12
SYCP1-208ENST00000493377 CACTIN-AS1Q8N1I8 211 aa8.03□□□□□ -1.12
SYCP1-208ENST00000493377 PLD4Q96BZ4 506 aa8.03□□□□□ -1.12
SYCP1-208ENST00000493377 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
SYCP1-208ENST00000493377 EPB42P16452 691 aa8.02□□□□□ -1.13
SYCP1-208ENST00000493377 CILP2Q8IUL8 1156 aa8.02□□□□□ -1.13
SYCP1-208ENST00000493377 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
SYCP1-208ENST00000493377 PAK6Q9NQU5 681 aaPredicted RBP8.02□□□□□ -1.13
SYCP1-208ENST00000493377 TMEM132AQ24JP5 1023 aa8.01□□□□□ -1.13
SYCP1-208ENST00000493377 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
SYCP1-208ENST00000493377 OSBPL1AQ9BXW6 950 aa8.01□□□□□ -1.13
SYCP1-208ENST00000493377 CD68P34810 354 aaPredicted RBP8□□□□□ -1.13
SYCP1-208ENST00000493377 MTMR14Q8NCE2 650 aa8□□□□□ -1.13
SYCP1-208ENST00000493377 GALNT11Q8NCW6 608 aa8□□□□□ -1.13
SYCP1-208ENST00000493377 ZSCAN18Q8TBC5 510 aaPredicted RBP8□□□□□ -1.13
SYCP1-208ENST00000493377 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
SYCP1-208ENST00000493377 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
SYCP1-208ENST00000493377 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
SYCP1-208ENST00000493377 KIAA1211Q6ZU35 1233 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 TTLL10Q6ZVT0 673 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 BANK1Q8NDB2 785 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
SYCP1-208ENST00000493377 CSRNP1Q96S65 589 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 PPME1Q9Y570 386 aa7.99□□□□□ -1.13
SYCP1-208ENST00000493377 PSME1Q06323 249 aa7.98□□□□□ -1.13
SYCP1-208ENST00000493377 TMEM40Q8WWA1 233 aa7.98□□□□□ -1.13
SYCP1-208ENST00000493377 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
SYCP1-208ENST00000493377 METTL22Q9BUU2 404 aaPredicted RBP7.98□□□□□ -1.13
SYCP1-208ENST00000493377 F13BP05160 661 aa7.97□□□□□ -1.13
SYCP1-208ENST00000493377 RARAP10276 462 aa7.97□□□□□ -1.13
SYCP1-208ENST00000493377 GTF2IP78347 998 aa7.97□□□□□ -1.13
SYCP1-208ENST00000493377 LCNL1Q6ZST4 164 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms