RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 BICC1Q9H694 974 aaKnown RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 DENND2AQ9ULE3 1009 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 CHD2O14647 1828 aaKnown RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 GCKRQ14397 625 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 DPP8Q6V1X1 898 aaPredicted RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 MEIS3Q99687 375 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 NF2P35240 595 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 MCM2P49736 904 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 PUM3Q15397 648 aaKnown RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 SAFBQ15424 915 aaKnown RBP eCLIP7.49□□□□□ -1.21
NF1-215ENST00000493220 PLCD4Q9BRC7 762 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 RNF41Q9H4P4 317 aaPredicted RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 CTSWP56202 376 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 RC3H1Q5TC82 1133 aaKnown RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 CRNKL1Q9BZJ0 848 aaKnown RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 CCDC69A6NI79 296 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 CCDC8Q9H0W5 538 aaPredicted RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 COL5A2P05997 1499 aaPredicted RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 KCNQ3O43525 872 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 UFL1O94874 794 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 TTC41PQ6P2S7 1318 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 GOLGA6L6A8MZA4 724 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 MAP4K4O95819 1239 aaPredicted RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 JARID2Q92833 1246 aaPredicted RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 TNS2Q63HR2 1409 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 TNNI2P48788 182 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 MSL1Q68DK7 614 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 FAM89AQ96GI7 184 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 NSFL1CQ9UNZ2 370 aaKnown RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 RRP12Q5JTH9 1297 aaKnown RBP7.48□□□□□ -1.21
NF1-215ENST00000493220 NIM1KQ8IY84 436 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 BOLA2Q9H3K6 86 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 USP16Q9Y5T5 823 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 COL15A1P39059 1388 aa7.48□□□□□ -1.21
NF1-215ENST00000493220 ATP2B4P23634 1241 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 TXNRD1Q16881 649 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 GIGYF2Q6Y7W6 1299 aaKnown RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 FNBP4Q8N3X1 1017 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 IL27Q8NEV9 243 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 HOOK2Q96ED9 719 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 UBAC1Q9BSL1 405 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 FAM182BQ5T319 152 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 PXDNQ92626 1479 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 EYA2O00167 538 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 SERPINB2P05120 415 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 GNAT2P19087 354 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 BRPF1P55201 1214 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 NKX1-1Q15270 411 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 G2E3Q7L622 706 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 MPNDQ8N594 471 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 C22orf23Q9BZE7 217 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 NAPBQ9H115 298 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 ABCC6O95255 1503 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 HCLS1P14317 486 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 CEP85Q6P2H3 762 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 SYAP1Q96A49 352 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 CYP46A1Q9Y6A2 500 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 MED1Q15648 1581 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 CARMIL3Q8ND23 1372 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 MPHOSPH10O00566 681 aaKnown RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 GPR162Q16538 588 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 NARFQ9UHQ1 456 aa7.47□□□□□ -1.21
NF1-215ENST00000493220 NOP58Q9Y2X3 529 aaKnown RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 COL14A1Q05707 1796 aaKnown RBP7.47□□□□□ -1.21
NF1-215ENST00000493220 PPEF1O14829 653 aaPredicted RBP7.46□□□□□ -1.21
NF1-215ENST00000493220 CDKL5O76039 1030 aa7.46□□□□□ -1.21
NF1-215ENST00000493220 MKNK2Q9HBH9 465 aa7.46□□□□□ -1.21
NF1-215ENST00000493220 ROBO1Q9Y6N7 1651 aa7.46□□□□□ -1.21
NF1-215ENST00000493220 RABEP1Q15276 862 aa7.46□□□□□ -1.22
NF1-215ENST00000493220 CWC27Q6UX04 472 aaKnown RBP7.46□□□□□ -1.22
NF1-215ENST00000493220 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
NF1-215ENST00000493220 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.22
NF1-215ENST00000493220 HIBADHP31937 336 aaKnown RBP7.46□□□□□ -1.22
NF1-215ENST00000493220 ATP2B2Q01814 1243 aa7.46□□□□□ -1.22
NF1-215ENST00000493220 C20orf194Q5TEA3 1177 aa7.46□□□□□ -1.22
NF1-215ENST00000493220 ZNF444Q8N0Y2 327 aaPredicted RBP7.46□□□□□ -1.22
NF1-215ENST00000493220 LARGE2Q8N3Y3 721 aa7.46□□□□□ -1.22
NF1-215ENST00000493220 GOLIM4O00461 696 aa7.45□□□□□ -1.22
NF1-215ENST00000493220 LDHBP07195 334 aaKnown RBP7.45□□□□□ -1.22
NF1-215ENST00000493220 NPR1P16066 1061 aa7.45□□□□□ -1.22
NF1-215ENST00000493220 NUCB1Q02818 461 aa7.45□□□□□ -1.22
NF1-215ENST00000493220 PDE4BQ07343 736 aa7.45□□□□□ -1.22
NF1-215ENST00000493220 SF3A1Q15459 793 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms