RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
RER1-208ENST00000493207 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
RER1-208ENST00000493207 FTSJ3Q8IY81 847 aaKnown RBP21.26■□□□□ 0.99
RER1-208ENST00000493207 CCDC85AQ96PX6 553 aaPredicted RBP21.26■□□□□ 0.99
RER1-208ENST00000493207 CRAMP1Q96RY5 1269 aa21.26■□□□□ 0.99
RER1-208ENST00000493207 UTYO14607 1347 aa21.26■□□□□ 0.99
RER1-208ENST00000493207 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
RER1-208ENST00000493207 PLA2G12BQ9BX93 195 aa21.25■□□□□ 0.99
RER1-208ENST00000493207 USP44Q9H0E7 712 aa21.25■□□□□ 0.99
RER1-208ENST00000493207 COL4A1P02462 1669 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 C21orf2O43822 256 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 PLIN1O60240 522 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
RER1-208ENST00000493207 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 SUCLG2Q96I99 432 aa21.24■□□□□ 0.99
RER1-208ENST00000493207 SPEF2Q9C093 1822 aa21.23■□□□□ 0.99
RER1-208ENST00000493207 RLBP1P12271 317 aa21.23■□□□□ 0.99
RER1-208ENST00000493207 FOXO4P98177 505 aa21.23■□□□□ 0.99
RER1-208ENST00000493207 PPEF1O14829 653 aaPredicted RBP21.22■□□□□ 0.99
RER1-208ENST00000493207 GRAPQ13588 217 aa21.22■□□□□ 0.99
RER1-208ENST00000493207 GRAPLQ8TC17 118 aaPredicted RBP21.22■□□□□ 0.99
RER1-208ENST00000493207 SEC31BQ9NQW1 1179 aa21.22■□□□□ 0.99
RER1-208ENST00000493207 EPHA10Q5JZY3 1008 aa21.21■□□□□ 0.99
RER1-208ENST00000493207 OLFM4Q6UX06 510 aa21.21■□□□□ 0.99
RER1-208ENST00000493207 ARHGAP27Q6ZUM4 889 aa21.21■□□□□ 0.99
RER1-208ENST00000493207 GREM2Q9H772 168 aa21.21■□□□□ 0.99
RER1-208ENST00000493207 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 CSF1RP07333 972 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 SLC51AQ86UW1 340 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 ITPRIPQ8IWB1 547 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 PANK1Q8TE04 598 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 C7orf43Q8WVR3 580 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 CELF1Q92879 486 aaKnown RBP21.2■□□□□ 0.98
RER1-208ENST00000493207 KAZALD1Q96I82 304 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 MEIS3Q99687 375 aa21.2■□□□□ 0.98
RER1-208ENST00000493207 BBOX1O75936 387 aa21.19■□□□□ 0.98
RER1-208ENST00000493207 UBTFL1P0CB47 393 aaPredicted RBP21.19■□□□□ 0.98
RER1-208ENST00000493207 FAM161AQ3B820 660 aa21.19■□□□□ 0.98
RER1-208ENST00000493207 LMBR1LQ6UX01 489 aa21.19■□□□□ 0.98
RER1-208ENST00000493207 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.19■□□□□ 0.98
RER1-208ENST00000493207 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
RER1-208ENST00000493207 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
RER1-208ENST00000493207 RTL9Q8NET4 1388 aa21.19■□□□□ 0.98
RER1-208ENST00000493207 CHD4Q14839 1912 aa21.18■□□□□ 0.98
RER1-208ENST00000493207 MS4A1P11836 297 aa21.18■□□□□ 0.98
RER1-208ENST00000493207 SOGA3Q5TF21 947 aa21.18■□□□□ 0.98
RER1-208ENST00000493207 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
RER1-208ENST00000493207 ITGA6P23229 1130 aa21.17■□□□□ 0.98
RER1-208ENST00000493207 RPS8P62241 208 aaKnown RBP21.17■□□□□ 0.98
RER1-208ENST00000493207 CCDC93Q567U6 631 aa21.17■□□□□ 0.98
RER1-208ENST00000493207 ATP6V0A2Q9Y487 856 aa21.17■□□□□ 0.98
RER1-208ENST00000493207 GNAI3P08754 354 aa21.16■□□□□ 0.98
RER1-208ENST00000493207 RASSF7Q02833 373 aa21.16■□□□□ 0.98
RER1-208ENST00000493207 ANKRD18AQ8IVF6 992 aa21.16■□□□□ 0.98
RER1-208ENST00000493207 ANKRD44Q8N8A2 993 aa21.16■□□□□ 0.98
RER1-208ENST00000493207 CDC5LQ99459 802 aaKnown RBP21.16■□□□□ 0.98
RER1-208ENST00000493207 SBF1O95248 1867 aa21.15■□□□□ 0.98
RER1-208ENST00000493207 CCDC88AQ3V6T2 1871 aa21.15■□□□□ 0.98
RER1-208ENST00000493207 C20orf194Q5TEA3 1177 aa21.15■□□□□ 0.98
RER1-208ENST00000493207 TMC4Q7Z404 712 aa21.15■□□□□ 0.98
RER1-208ENST00000493207 TMX4Q9H1E5 349 aaPredicted RBP21.15■□□□□ 0.98
RER1-208ENST00000493207 LRRFIP2Q9Y608 721 aaKnown RBP21.15■□□□□ 0.98
RER1-208ENST00000493207 ANKRD18BA2A2Z9 1011 aa21.14■□□□□ 0.97
RER1-208ENST00000493207 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
RER1-208ENST00000493207 RABL6Q3YEC7 729 aaPredicted RBP21.14■□□□□ 0.97
RER1-208ENST00000493207 SP8Q8IXZ3 490 aa21.14■□□□□ 0.97
RER1-208ENST00000493207 RTKN2Q8IZC4 609 aa21.14■□□□□ 0.97
RER1-208ENST00000493207 NFKBIEO00221 500 aa21.13■□□□□ 0.97
RER1-208ENST00000493207 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
RER1-208ENST00000493207 CCDC57Q2TAC2 916 aa21.13■□□□□ 0.97
RER1-208ENST00000493207 CC2D2BQ6DHV5 1058 aa21.13■□□□□ 0.97
RER1-208ENST00000493207 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
RER1-208ENST00000493207 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
RER1-208ENST00000493207 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
RER1-208ENST00000493207 IGHMBP2P38935 993 aaKnown RBP21.12■□□□□ 0.97
RER1-208ENST00000493207 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
RER1-208ENST00000493207 TAOK3Q9H2K8 898 aa21.12■□□□□ 0.97
RER1-208ENST00000493207 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
RER1-208ENST00000493207 TAF7LQ5H9L4 462 aa21.11■□□□□ 0.97
RER1-208ENST00000493207 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
RER1-208ENST00000493207 GNAI2P04899 355 aa21.1■□□□□ 0.97
RER1-208ENST00000493207 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.974e-6■■□□□ 13.6
RER1-208ENST00000493207 GRIPAP1Q4V328 841 aa21.1■□□□□ 0.97
RER1-208ENST00000493207 ZNF594Q96JF6 807 aaPredicted RBP21.1■□□□□ 0.97
RER1-208ENST00000493207 MPHOSPH8Q99549 860 aa21.1■□□□□ 0.97
RER1-208ENST00000493207 BSDC1Q9NW68 430 aaPredicted RBP21.1■□□□□ 0.97
RER1-208ENST00000493207 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
RER1-208ENST00000493207 LTBP3Q9NS15 1303 aa21.09■□□□□ 0.97
RER1-208ENST00000493207 PRELPP51888 382 aa21.09■□□□□ 0.97
RER1-208ENST00000493207 DPP8Q6V1X1 898 aaPredicted RBP21.09■□□□□ 0.97
RER1-208ENST00000493207 A0A1B0GUL6 1792 aa21.08■□□□□ 0.97
RER1-208ENST00000493207 DICER1Q9UPY3 1922 aaKnown RBP21.08■□□□□ 0.97
RER1-208ENST00000493207 GPSM2P81274 684 aa21.08■□□□□ 0.97
RER1-208ENST00000493207 MPNDQ8N594 471 aa21.08■□□□□ 0.97
RER1-208ENST00000493207 PSMD1Q99460 953 aa21.08■□□□□ 0.97
RER1-208ENST00000493207 C1orf115Q9H7X2 142 aa21.08■□□□□ 0.97
RER1-208ENST00000493207 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
RER1-208ENST00000493207 DDX19BQ9UMR2 479 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms