RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 TAF1P21675 1872 aa29.42■■■□□ 2.3
HMG20B-214ENST00000493191 TRAF5O00463 557 aa29.41■■■□□ 2.3
HMG20B-214ENST00000493191 RUNDC1Q96C34 613 aa29.41■■■□□ 2.3
HMG20B-214ENST00000493191 LBX1P52954 281 aa29.4■■■□□ 2.3
HMG20B-214ENST00000493191 GRAPQ13588 217 aa29.4■■■□□ 2.3
HMG20B-214ENST00000493191 GRAPLQ8TC17 118 aaPredicted RBP29.4■■■□□ 2.3
HMG20B-214ENST00000493191 ADARB2Q9NS39 739 aaKnown RBP29.4■■■□□ 2.3
HMG20B-214ENST00000493191 GMPSP49915 693 aaPredicted RBP29.39■■■□□ 2.3
HMG20B-214ENST00000493191 KIAA2012Q0VF49 1180 aa29.39■■■□□ 2.3
HMG20B-214ENST00000493191 WDR43Q15061 677 aaKnown RBP eCLIP29.39■■■□□ 2.3
HMG20B-214ENST00000493191 CST9Q5W186 159 aa29.39■■■□□ 2.3
HMG20B-214ENST00000493191 TRPM7Q96QT4 1865 aa29.38■■■□□ 2.29
HMG20B-214ENST00000493191 HDGFL1Q5TGJ6 251 aa29.38■■■□□ 2.29
HMG20B-214ENST00000493191 PAXIP1Q6ZW49 1069 aaPredicted RBP29.38■■■□□ 2.29
HMG20B-214ENST00000493191 RAD17O75943 681 aa29.37■■■□□ 2.29
HMG20B-214ENST00000493191 CIAPIN1Q6FI81 312 aa29.37■■■□□ 2.29
HMG20B-214ENST00000493191 ANKRD13DQ6ZTN6 518 aa29.37■■■□□ 2.29
HMG20B-214ENST00000493191 PLBD2Q8NHP8 589 aa29.37■■■□□ 2.29
HMG20B-214ENST00000493191 MAP2K1Q02750 393 aaPredicted RBP29.36■■■□□ 2.29
HMG20B-214ENST00000493191 GRM1Q13255 1194 aa29.36■■■□□ 2.29
HMG20B-214ENST00000493191 CAPNS2Q96L46 248 aa29.36■■■□□ 2.29
HMG20B-214ENST00000493191 ADAMTS8Q9UP79 889 aa29.36■■■□□ 2.29
HMG20B-214ENST00000493191 ATP5J2-PTCD1G3V325 749 aa29.35■■■□□ 2.29
HMG20B-214ENST00000493191 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
HMG20B-214ENST00000493191 HSPA8P11142 646 aaKnown RBP29.34■■■□□ 2.29
HMG20B-214ENST00000493191 CYP4F22Q6NT55 531 aa29.34■■■□□ 2.29
HMG20B-214ENST00000493191 FAM89AQ96GI7 184 aa29.34■■■□□ 2.29
HMG20B-214ENST00000493191 DBF4Q9UBU7 674 aaPredicted RBP29.34■■■□□ 2.29
HMG20B-214ENST00000493191 HOXB7P09629 217 aa29.33■■■□□ 2.29
HMG20B-214ENST00000493191 TNIP1Q15025 636 aa29.33■■■□□ 2.29
HMG20B-214ENST00000493191 ISCA1Q9BUE6 129 aa29.33■■■□□ 2.29
HMG20B-214ENST00000493191 DDX60Q8IY21 1712 aaKnown RBP29.32■■■□□ 2.28
HMG20B-214ENST00000493191 YDJCA8MPS7 323 aa29.32■■■□□ 2.28
HMG20B-214ENST00000493191 ECE1P42892 770 aa29.32■■■□□ 2.28
HMG20B-214ENST00000493191 TMC4Q7Z404 712 aa29.32■■■□□ 2.28
HMG20B-214ENST00000493191 TLL2Q9Y6L7 1015 aa29.32■■■□□ 2.28
HMG20B-214ENST00000493191 RTL5Q5HYW3 569 aaPredicted RBP29.31■■■□□ 2.28
HMG20B-214ENST00000493191 DUSP27Q5VZP5 1158 aa29.31■■■□□ 2.28
HMG20B-214ENST00000493191 CFAP44Q96MT7 982 aa29.31■■■□□ 2.28
HMG20B-214ENST00000493191 GPR101Q96P66 508 aaPredicted RBP29.31■■■□□ 2.28
HMG20B-214ENST00000493191 GLIS2Q9BZE0 524 aaPredicted RBP29.31■■■□□ 2.28
HMG20B-214ENST00000493191 CELF1Q92879 486 aaKnown RBP29.3■■■□□ 2.28
HMG20B-214ENST00000493191 SHTN1A0MZ66 631 aa29.29■■■□□ 2.28
HMG20B-214ENST00000493191 CELF2O95319 508 aaKnown RBP29.29■■■□□ 2.28
HMG20B-214ENST00000493191 HIRAP54198 1017 aaPredicted RBP29.29■■■□□ 2.28
HMG20B-214ENST00000493191 SF3B3Q15393 1217 aaKnown RBP29.29■■■□□ 2.28
HMG20B-214ENST00000493191 HYPKQ9NX55 129 aa29.29■■■□□ 2.28
HMG20B-214ENST00000493191 PGAP2Q9UHJ9 254 aa29.29■■■□□ 2.28
HMG20B-214ENST00000493191 CNOT7Q9UIV1 285 aaKnown RBP29.29■■■□□ 2.28
HMG20B-214ENST00000493191 NSFL1CQ9UNZ2 370 aaKnown RBP29.29■■■□□ 2.28
HMG20B-214ENST00000493191 DUOX1Q9NRD9 1551 aa29.29■■■□□ 2.28
HMG20B-214ENST00000493191 CDHR2Q9BYE9 1310 aa29.28■■■□□ 2.28
HMG20B-214ENST00000493191 TRPM4Q8TD43 1214 aa29.28■■■□□ 2.28
HMG20B-214ENST00000493191 MBIPQ9NS73 344 aa29.28■■■□□ 2.28
HMG20B-214ENST00000493191 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
HMG20B-214ENST00000493191 LRRC37AA6NMS7 1700 aa29.27■■■□□ 2.28
HMG20B-214ENST00000493191 RIMBP2O15034 1052 aa29.26■■■□□ 2.27
HMG20B-214ENST00000493191 ZC3H15Q8WU90 426 aaKnown RBP29.26■■■□□ 2.27
HMG20B-214ENST00000493191 BEGAINQ9BUH8 593 aa29.26■■■□□ 2.27
HMG20B-214ENST00000493191 ZBTB12Q9Y330 459 aaPredicted RBP29.26■■■□□ 2.27
HMG20B-214ENST00000493191 THSD7BQ9C0I4 1608 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 H7C1D1 291 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 AOC2O75106 756 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 SAPCD2Q86UD0 394 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 MICALL2Q8IY33 904 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 ZNF408Q9H9D4 720 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 DBNDD1Q9H9R9 158 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 POLLQ9UGP5 575 aa29.25■■■□□ 2.27
HMG20B-214ENST00000493191 C6orf229H3BNL8 230 aa29.24■■■□□ 2.27
HMG20B-214ENST00000493191 IRS4O14654 1257 aaPredicted RBP29.24■■■□□ 2.27
HMG20B-214ENST00000493191 GPSM2P81274 684 aa29.24■■■□□ 2.27
HMG20B-214ENST00000493191 COL4A1P02462 1669 aa29.24■■■□□ 2.27
HMG20B-214ENST00000493191 PSMD14O00487 310 aa29.23■■■□□ 2.27
HMG20B-214ENST00000493191 TRIM28Q13263 835 aaKnown RBP29.23■■■□□ 2.27
HMG20B-214ENST00000493191 CDC37L1Q7L3B6 337 aa29.22■■■□□ 2.27
HMG20B-214ENST00000493191 RIC3Q7Z5B4 369 aa29.22■■■□□ 2.27
HMG20B-214ENST00000493191 ELL2O00472 640 aaPredicted RBP29.21■■■□□ 2.27
HMG20B-214ENST00000493191 ZNF853P0CG23 659 aa29.21■■■□□ 2.27
HMG20B-214ENST00000493191 SAMD7Q7Z3H4 446 aa29.21■■■□□ 2.27
HMG20B-214ENST00000493191 PHAXQ9H814 394 aaKnown RBP29.21■■■□□ 2.27
HMG20B-214ENST00000493191 APAF1O14727 1248 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 MAP2K2P36507 400 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 RPS8P62241 208 aaKnown RBP29.2■■■□□ 2.26
HMG20B-214ENST00000493191 DOK7Q18PE1 504 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 USP48Q86UV5 1035 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 KCNQ5Q9NR82 932 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 TSKSQ9UJT2 592 aa29.2■■■□□ 2.26
HMG20B-214ENST00000493191 GOLGA2Q08379 1002 aa29.19■■■□□ 2.26
HMG20B-214ENST00000493191 DPF2Q92785 391 aa29.19■■■□□ 2.26
HMG20B-214ENST00000493191 PRKRIP1Q9H875 184 aaPredicted RBP29.19■■■□□ 2.26
HMG20B-214ENST00000493191 ECE2O60344 883 aa29.18■■■□□ 2.26
HMG20B-214ENST00000493191 DLK2Q6UY11 383 aa29.18■■■□□ 2.26
HMG20B-214ENST00000493191 ZBTB38Q8NAP3 1195 aaPredicted RBP29.18■■■□□ 2.26
HMG20B-214ENST00000493191 ABHD8Q96I13 439 aa29.18■■■□□ 2.26
HMG20B-214ENST00000493191 TBC1D10BQ4KMP7 808 aaPredicted RBP29.17■■■□□ 2.26
HMG20B-214ENST00000493191 TBC1D16Q8TBP0 767 aa29.17■■■□□ 2.26
HMG20B-214ENST00000493191 HHIPL1Q96JK4 782 aa29.17■■■□□ 2.26
HMG20B-214ENST00000493191 EYA3Q99504 573 aa29.17■■■□□ 2.26
HMG20B-214ENST00000493191 MYD88Q99836 296 aa29.17■■■□□ 2.26
HMG20B-214ENST00000493191 SEC31BQ9NQW1 1179 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms