RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
COL12A1-209ENST00000493109 QTRT2Q9H974 415 aaKnown RBP11.16□□□□□ -0.62
COL12A1-209ENST00000493109 DEAF1O75398 565 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-209ENST00000493109 IREB2P48200 963 aaKnown RBP11.15□□□□□ -0.62
COL12A1-209ENST00000493109 DTWD1Q8N5C7 304 aa11.15□□□□□ -0.62
COL12A1-209ENST00000493109 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
COL12A1-209ENST00000493109 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-209ENST00000493109 LCE3BQ5TA77 95 aa11.14□□□□□ -0.63
COL12A1-209ENST00000493109 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
COL12A1-209ENST00000493109 GPLD1P80108 840 aa11.12□□□□□ -0.63
COL12A1-209ENST00000493109 DGKZQ13574 1117 aa11.12□□□□□ -0.63
COL12A1-209ENST00000493109 SASH3O75995 380 aa11.11□□□□□ -0.63
COL12A1-209ENST00000493109 TTC9Q92623 222 aa11.11□□□□□ -0.63
COL12A1-209ENST00000493109 ARXQ96QS3 562 aa11.11□□□□□ -0.63
COL12A1-209ENST00000493109 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L21D6R901 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 EPB42P16452 691 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 ARSDP51689 593 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 LARP1Q6PKG0 1096 aaKnown RBP11.1□□□□□ -0.63
COL12A1-209ENST00000493109 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
COL12A1-209ENST00000493109 OPLAHO14841 1288 aa11.09□□□□□ -0.63
COL12A1-209ENST00000493109 RARAP10276 462 aa11.09□□□□□ -0.63
COL12A1-209ENST00000493109 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
COL12A1-209ENST00000493109 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
COL12A1-209ENST00000493109 SMG9Q9H0W8 520 aaKnown RBP11.09□□□□□ -0.63
COL12A1-209ENST00000493109 DLL1O00548 723 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 MICAL2O94851 1124 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 WEE1P30291 646 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 PCSK7Q16549 785 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 KRTAP19-1Q8IUB9 90 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 RNF112Q9ULX5 631 aa11.08□□□□□ -0.64
COL12A1-209ENST00000493109 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
COL12A1-209ENST00000493109 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-209ENST00000493109 MYO19Q96H55 970 aa11.07□□□□□ -0.64
COL12A1-209ENST00000493109 LRFN2Q9ULH4 789 aa11.07□□□□□ -0.64
COL12A1-209ENST00000493109 PRR23CQ6ZRP0 262 aa11.06□□□□□ -0.64
COL12A1-209ENST00000493109 C11orf16Q9NQ32 467 aa11.06□□□□□ -0.64
COL12A1-209ENST00000493109 NRLP54845 237 aa11.05□□□□□ -0.64
COL12A1-209ENST00000493109 DZIP1LQ8IYY4 767 aaKnown RBP11.05□□□□□ -0.64
COL12A1-209ENST00000493109 ALX3O95076 343 aa11.04□□□□□ -0.64
COL12A1-209ENST00000493109 C11orf91Q3C1V1 193 aa11.04□□□□□ -0.64
COL12A1-209ENST00000493109 TLR7Q9NYK1 1049 aaKnown RBP11.04□□□□□ -0.64
COL12A1-209ENST00000493109 RTCBQ9Y3I0 505 aaKnown RBP11.04□□□□□ -0.64
COL12A1-209ENST00000493109 J3QW42 95 aa11.03□□□□□ -0.64
COL12A1-209ENST00000493109 FOXO3O43524 673 aa11.03□□□□□ -0.64
COL12A1-209ENST00000493109 EGFRP00533 1210 aa11.03□□□□□ -0.64
COL12A1-209ENST00000493109 EIF2AK2P19525 551 aaKnown RBP11.02□□□□□ -0.65
COL12A1-209ENST00000493109 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
COL12A1-209ENST00000493109 F8W735 103 aaPredicted RBP11□□□□□ -0.65
COL12A1-209ENST00000493109 PLD4Q96BZ4 506 aa11□□□□□ -0.65
COL12A1-209ENST00000493109 AKTIPQ9H8T0 292 aa11□□□□□ -0.65
COL12A1-209ENST00000493109 MMP20O60882 483 aa10.99□□□□□ -0.65
COL12A1-209ENST00000493109 XYLBO75191 536 aa10.99□□□□□ -0.65
COL12A1-209ENST00000493109 KRTAP9-9Q9BYP9 154 aa10.99□□□□□ -0.65
COL12A1-209ENST00000493109 KRTAP9-4Q9BYQ2 154 aa10.99□□□□□ -0.65
COL12A1-209ENST00000493109 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
COL12A1-209ENST00000493109 LMOD1P29536 600 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-209ENST00000493109 SETDB1Q15047 1291 aa10.98□□□□□ -0.65
COL12A1-209ENST00000493109 Q6ZS46 218 aa10.98□□□□□ -0.65
COL12A1-209ENST00000493109 TREML1Q86YW5 311 aa10.98□□□□□ -0.65
COL12A1-209ENST00000493109 RGL4Q8IZJ4 473 aa10.98□□□□□ -0.65
COL12A1-209ENST00000493109 NSUN5Q96P11 429 aaKnown RBP10.98□□□□□ -0.65
COL12A1-209ENST00000493109 LOC102724428A0A0B4J2F2 783 aa10.97□□□□□ -0.65
COL12A1-209ENST00000493109 HOXD8P13378 290 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-209ENST00000493109 FSTP19883 344 aa10.97□□□□□ -0.65
COL12A1-209ENST00000493109 SIK1P57059 783 aa10.97□□□□□ -0.65
COL12A1-209ENST00000493109 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-209ENST00000493109 TMEM130Q8N3G9 435 aa10.97□□□□□ -0.65
COL12A1-209ENST00000493109 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
COL12A1-209ENST00000493109 FAM26DQ5JW98 314 aa10.96□□□□□ -0.65
COL12A1-209ENST00000493109 COX20Q5RI15 118 aa10.96□□□□□ -0.65
COL12A1-209ENST00000493109 CMTR1Q8N1G2 835 aaKnown RBP10.96□□□□□ -0.65
COL12A1-209ENST00000493109 TRIM33Q9UPN9 1127 aa10.96□□□□□ -0.65
COL12A1-209ENST00000493109 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-209ENST00000493109 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-209ENST00000493109 AGGF1Q8N302 714 aaeCLIP10.95□□□□□ -0.66
COL12A1-209ENST00000493109 IL22RA1Q8N6P7 574 aa10.95□□□□□ -0.66
COL12A1-209ENST00000493109 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
COL12A1-209ENST00000493109 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
COL12A1-209ENST00000493109 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
COL12A1-209ENST00000493109 SOX18P35713 384 aa10.93□□□□□ -0.66
COL12A1-209ENST00000493109 ETFBKMTQ8IXQ9 262 aa10.93□□□□□ -0.66
COL12A1-209ENST00000493109 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
COL12A1-209ENST00000493109 TM4SF5O14894 197 aa10.92□□□□□ -0.66
COL12A1-209ENST00000493109 PSAPP07602 524 aa10.92□□□□□ -0.66
COL12A1-209ENST00000493109 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms