RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PSDA5PKW4 1024 aaPredicted RBP8.67□□□□□ -1.02
HERC4-211ENST00000492996 TOMM70O94826 608 aa8.67□□□□□ -1.02
HERC4-211ENST00000492996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
HERC4-211ENST00000492996 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
HERC4-211ENST00000492996 EIF2S2P20042 333 aaKnown RBP8.66□□□□□ -1.02
HERC4-211ENST00000492996 PARP10Q53GL7 1025 aa8.66□□□□□ -1.02
HERC4-211ENST00000492996 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
HERC4-211ENST00000492996 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
HERC4-211ENST00000492996 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
HERC4-211ENST00000492996 BMP2KLQ5H9B9 411 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 SAGE1Q9NXZ1 904 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 CNTNAP1P78357 1384 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 PTPRCP08575 1304 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 DCTPP1Q9H773 170 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
HERC4-211ENST00000492996 MYH13Q9UKX3 1938 aa8.65□□□□□ -1.03
HERC4-211ENST00000492996 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.03
HERC4-211ENST00000492996 IFFO2Q5TF58 517 aa8.65□□□□□ -1.03
HERC4-211ENST00000492996 NYXQ9GZU5 481 aa8.65□□□□□ -1.03
HERC4-211ENST00000492996 PIM2Q9P1W9 311 aa8.65□□□□□ -1.03
HERC4-211ENST00000492996 ABCC12Q96J65 1359 aa8.65□□□□□ -1.03
HERC4-211ENST00000492996 RPAP1Q9BWH6 1393 aaPredicted RBP8.65□□□□□ -1.03
HERC4-211ENST00000492996 FLIIQ13045 1269 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 UTYO14607 1347 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 POTECB2RU33 542 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 NPR1P16066 1061 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 CCDC30Q5VVM6 783 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 ZNF530Q6P9A1 599 aaPredicted RBP8.64□□□□□ -1.03
HERC4-211ENST00000492996 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 ANXA1P04083 346 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
HERC4-211ENST00000492996 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
HERC4-211ENST00000492996 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
HERC4-211ENST00000492996 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 CNKSR1Q969H4 720 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 TFCP2L1Q9NZI6 479 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 EXOC6BQ9Y2D4 811 aa8.64□□□□□ -1.03
HERC4-211ENST00000492996 GLTPD2A6NH11 291 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 KCNQ3O43525 872 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 STARD3NLO95772 234 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 CABP4P57796 275 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 PDIA6Q15084 440 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
HERC4-211ENST00000492996 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
HERC4-211ENST00000492996 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 RASSF10A6NK89 507 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 SNRPA1P09661 255 aaKnown RBP8.63□□□□□ -1.03
HERC4-211ENST00000492996 LMNB1P20700 586 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 HSCBQ8IWL3 235 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 MASTLQ96GX5 879 aa8.63□□□□□ -1.03
HERC4-211ENST00000492996 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
HERC4-211ENST00000492996 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
HERC4-211ENST00000492996 SRGNP10124 158 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
HERC4-211ENST00000492996 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 CCT4P50991 539 aaKnown RBP8.62□□□□□ -1.03
HERC4-211ENST00000492996 EIF4A1P60842 406 aaKnown RBP8.62□□□□□ -1.03
HERC4-211ENST00000492996 TMED8Q6PL24 325 aaPredicted RBP8.62□□□□□ -1.03
HERC4-211ENST00000492996 TEFQ10587 303 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 SMC1BQ8NDV3 1235 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 ANTXR1Q9H6X2 564 aa8.62□□□□□ -1.03
HERC4-211ENST00000492996 CDC45O75419 566 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 GIGYF1O75420 1035 aaPredicted RBP8.61□□□□□ -1.03
HERC4-211ENST00000492996 GNAI2P04899 355 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 ISCA1Q9BUE6 129 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
HERC4-211ENST00000492996 HMMRO75330 724 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 HSP90AB3PQ58FF7 597 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 MTMR14Q8NCE2 650 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 ZNF652Q9Y2D9 606 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 PDS5AQ29RF7 1337 aaKnown RBP8.61□□□□□ -1.03
HERC4-211ENST00000492996 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 NFIXQ14938 502 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 TTC22Q5TAA0 569 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
HERC4-211ENST00000492996 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
HERC4-211ENST00000492996 NTSR2O95665 410 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 RBM25P49756 843 aaKnown RBP8.6□□□□□ -1.03
HERC4-211ENST00000492996 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
HERC4-211ENST00000492996 CD2BP2O95400 341 aaKnown RBP8.6□□□□□ -1.03
HERC4-211ENST00000492996 SDSP20132 328 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 RPS12P25398 132 aaKnown RBP8.6□□□□□ -1.03
HERC4-211ENST00000492996 PRELPP51888 382 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 KLRG1Q96E93 195 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 FRMPD3Q5JV73 1810 aa8.6□□□□□ -1.03
HERC4-211ENST00000492996 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
HERC4-211ENST00000492996 NFKBIEO00221 500 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms