RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 MTRQ99707 1265 aa9.72□□□□□ -0.85
SPTA1-208ENST00000492934 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
SPTA1-208ENST00000492934 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
SPTA1-208ENST00000492934 KDM2BQ8NHM5 1336 aa9.72□□□□□ -0.85
SPTA1-208ENST00000492934 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
SPTA1-208ENST00000492934 GRXCR2A6NFK2 248 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
SPTA1-208ENST00000492934 MAP3K7O43318 606 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 TM4SF1P30408 202 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 RASSF7Q02833 373 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 NFIXQ14938 502 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
SPTA1-208ENST00000492934 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
SPTA1-208ENST00000492934 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
SPTA1-208ENST00000492934 TEFQ10587 303 aa9.7□□□□□ -0.86
SPTA1-208ENST00000492934 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
SPTA1-208ENST00000492934 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
SPTA1-208ENST00000492934 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
SPTA1-208ENST00000492934 SIPA1L3O60292 1781 aaPredicted RBP9.7□□□□□ -0.86
SPTA1-208ENST00000492934 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
SPTA1-208ENST00000492934 STARD3NLO95772 234 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 SERPINB2P05120 415 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 BICDL1Q6ZP65 573 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 SAMD7Q7Z3H4 446 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 GAS2L2Q8NHY3 880 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
SPTA1-208ENST00000492934 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
SPTA1-208ENST00000492934 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
SPTA1-208ENST00000492934 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
SPTA1-208ENST00000492934 C2CD5Q86YS7 1000 aa9.68□□□□□ -0.86
SPTA1-208ENST00000492934 ZNF496Q96IT1 587 aaPredicted RBP9.68□□□□□ -0.86
SPTA1-208ENST00000492934 A0A087WZG4 1122 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 LMNB1P20700 586 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 OSBPP22059 807 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 HTRA3P83110 453 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 FSTL1Q12841 308 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 RRAGCQ9HB90 399 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 ANKRD31Q8N7Z5 1873 aa9.67□□□□□ -0.86
SPTA1-208ENST00000492934 CEMIPQ8WUJ3 1361 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 H0YIN7 160 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 NFKBIEO00221 500 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 NPHP1O15259 732 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 EIF5P55010 431 aaKnown RBP9.66□□□□□ -0.86
SPTA1-208ENST00000492934 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 FMNL2Q96PY5 1086 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 SBF1O95248 1867 aa9.66□□□□□ -0.86
SPTA1-208ENST00000492934 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 PRELPP51888 382 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 PRR5LQ6MZQ0 368 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
SPTA1-208ENST00000492934 CCDC24Q8N4L8 307 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 DNAJC5GQ8N7S2 189 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 SMC1BQ8NDV3 1235 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 IL17REQ8NFR9 667 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 TEX13AQ9BXU3 409 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-208ENST00000492934 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
SPTA1-208ENST00000492934 PDE6BP35913 854 aa9.64□□□□□ -0.87
SPTA1-208ENST00000492934 IL6STP40189 918 aaPredicted RBP9.64□□□□□ -0.87
SPTA1-208ENST00000492934 TSR1Q2NL82 804 aaKnown RBP9.64□□□□□ -0.87
SPTA1-208ENST00000492934 CNBD1Q8NA66 436 aa9.64□□□□□ -0.87
SPTA1-208ENST00000492934 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.871e-10■■□□□ 11.7
SPTA1-208ENST00000492934 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
SPTA1-208ENST00000492934 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
SPTA1-208ENST00000492934 GLTPD2A6NH11 291 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 BTBD11A6QL63 1104 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 SMAPO00193 183 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 A1BGP04217 495 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 GGCXP38435 758 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 ST5P78524 1137 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
SPTA1-208ENST00000492934 BRIP1Q9BX63 1249 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 CACNA1SQ13698 1873 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 ARFGEF2Q9Y6D5 1785 aa9.63□□□□□ -0.87
SPTA1-208ENST00000492934 KCNQ3O43525 872 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 C21orf2O43822 256 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-208ENST00000492934 PIP4K2AP48426 406 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-208ENST00000492934 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 PHACTR3Q96KR7 559 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
SPTA1-208ENST00000492934 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
SPTA1-208ENST00000492934 PRSS12P56730 875 aa9.61□□□□□ -0.87
SPTA1-208ENST00000492934 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPTA1-208ENST00000492934 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
SPTA1-208ENST00000492934 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
SPTA1-208ENST00000492934 MCM10Q7L590 875 aa9.61□□□□□ -0.87
SPTA1-208ENST00000492934 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
SPTA1-208ENST00000492934 TAOK3Q9H2K8 898 aa9.61□□□□□ -0.87
SPTA1-208ENST00000492934 FER1L6Q2WGJ9 1857 aa9.61□□□□□ -0.87
SPTA1-208ENST00000492934 LTBP3Q9NS15 1303 aa9.6□□□□□ -0.87
SPTA1-208ENST00000492934 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms