RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
CCM2-217ENST00000492883 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
CCM2-217ENST00000492883 NBPF7P0C2Y1 421 aaPredicted RBP17.61■□□□□ 0.41
CCM2-217ENST00000492883 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
CCM2-217ENST00000492883 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
CCM2-217ENST00000492883 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
CCM2-217ENST00000492883 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
CCM2-217ENST00000492883 RASSF7Q02833 373 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 TMC4Q7Z404 712 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 USP44Q9H0E7 712 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 TAOK3Q9H2K8 898 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 GREM2Q9H772 168 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
CCM2-217ENST00000492883 CACNA1FO60840 1977 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
CCM2-217ENST00000492883 UTYO14607 1347 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 NFKBIEO00221 500 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 CSF1RP07333 972 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 FOXO4P98177 505 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 C9orf131Q5VYM1 1079 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
CCM2-217ENST00000492883 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 SUCLG2Q96I99 432 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
CCM2-217ENST00000492883 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
CCM2-217ENST00000492883 LMNB1P20700 586 aa17.58■□□□□ 0.4
CCM2-217ENST00000492883 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
CCM2-217ENST00000492883 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
CCM2-217ENST00000492883 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
CCM2-217ENST00000492883 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
CCM2-217ENST00000492883 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
CCM2-217ENST00000492883 ITGA6P23229 1130 aa17.57■□□□□ 0.4
CCM2-217ENST00000492883 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCM2-217ENST00000492883 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
CCM2-217ENST00000492883 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
CCM2-217ENST00000492883 LTBP3Q9NS15 1303 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
CCM2-217ENST00000492883 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
CCM2-217ENST00000492883 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 MPNDQ8N594 471 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
CCM2-217ENST00000492883 RTL9Q8NET4 1388 aa17.55■□□□□ 0.4
CCM2-217ENST00000492883 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
CCM2-217ENST00000492883 DPP8Q6V1X1 898 aaPredicted RBP17.55■□□□□ 0.4
CCM2-217ENST00000492883 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
CCM2-217ENST00000492883 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
CCM2-217ENST00000492883 BICC1Q9H694 974 aaKnown RBP17.55■□□□□ 0.4
CCM2-217ENST00000492883 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
CCM2-217ENST00000492883 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
CCM2-217ENST00000492883 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 MS4A1P11836 297 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 PRELPP51888 382 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 PSMD1Q99460 953 aa17.54■□□□□ 0.4
CCM2-217ENST00000492883 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
CCM2-217ENST00000492883 DDX60Q8IY21 1712 aaKnown RBP17.53■□□□□ 0.4
CCM2-217ENST00000492883 GNAI3P08754 354 aa17.53■□□□□ 0.4
CCM2-217ENST00000492883 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
CCM2-217ENST00000492883 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
CCM2-217ENST00000492883 MEIS3Q99687 375 aa17.53■□□□□ 0.4
CCM2-217ENST00000492883 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
CCM2-217ENST00000492883 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
CCM2-217ENST00000492883 PLIN1O60240 522 aa17.52■□□□□ 0.4
CCM2-217ENST00000492883 IARSP41252 1262 aaKnown RBP17.52■□□□□ 0.4
CCM2-217ENST00000492883 GPSM2P81274 684 aa17.52■□□□□ 0.4
CCM2-217ENST00000492883 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.4
CCM2-217ENST00000492883 C6orf229H3BNL8 230 aa17.51■□□□□ 0.39
CCM2-217ENST00000492883 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
CCM2-217ENST00000492883 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
CCM2-217ENST00000492883 PANK1Q8TE04 598 aa17.51■□□□□ 0.39
CCM2-217ENST00000492883 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
CCM2-217ENST00000492883 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
CCM2-217ENST00000492883 RLBP1P12271 317 aa17.5■□□□□ 0.39
CCM2-217ENST00000492883 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
CCM2-217ENST00000492883 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
CCM2-217ENST00000492883 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
CCM2-217ENST00000492883 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
CCM2-217ENST00000492883 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
CCM2-217ENST00000492883 PPIP5K2O43314 1243 aa17.49■□□□□ 0.39
CCM2-217ENST00000492883 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
CCM2-217ENST00000492883 VPS33BQ9H267 617 aa17.49■□□□□ 0.39
CCM2-217ENST00000492883 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
CCM2-217ENST00000492883 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
CCM2-217ENST00000492883 GNAI2P04899 355 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 AOC3Q16853 763 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
CCM2-217ENST00000492883 EYA3Q99504 573 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 POLLQ9UGP5 575 aa17.48■□□□□ 0.39
CCM2-217ENST00000492883 LAMB2P55268 1798 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms