RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 SOGA3Q5TF21 947 aa21.12■□□□□ 0.97
CCDC13-208ENST00000492806 INTS3Q68E01 1043 aaKnown RBP21.12■□□□□ 0.97
CCDC13-208ENST00000492806 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
CCDC13-208ENST00000492806 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
CCDC13-208ENST00000492806 WWC3Q9ULE0 1092 aa21.12■□□□□ 0.97
CCDC13-208ENST00000492806 MS4A1P11836 297 aa21.11■□□□□ 0.97
CCDC13-208ENST00000492806 CTSWP56202 376 aa21.11■□□□□ 0.97
CCDC13-208ENST00000492806 HDAC5Q9UQL6 1122 aa21.11■□□□□ 0.97
CCDC13-208ENST00000492806 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
CCDC13-208ENST00000492806 BBOX1O75936 387 aa21.1■□□□□ 0.97
CCDC13-208ENST00000492806 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
CCDC13-208ENST00000492806 GRAPQ13588 217 aa21.09■□□□□ 0.97
CCDC13-208ENST00000492806 CC2D2BQ6DHV5 1058 aa21.09■□□□□ 0.97
CCDC13-208ENST00000492806 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.09■□□□□ 0.97
CCDC13-208ENST00000492806 GRAPLQ8TC17 118 aaPredicted RBP21.09■□□□□ 0.97
CCDC13-208ENST00000492806 USP44Q9H0E7 712 aa21.09■□□□□ 0.97
CCDC13-208ENST00000492806 GRIPAP1Q4V328 841 aa21.08■□□□□ 0.97
CCDC13-208ENST00000492806 FTSJ3Q8IY81 847 aaKnown RBP21.08■□□□□ 0.97
CCDC13-208ENST00000492806 DZIP1LQ8IYY4 767 aaKnown RBP21.08■□□□□ 0.97
CCDC13-208ENST00000492806 TTLL11Q8NHH1 800 aa21.08■□□□□ 0.97
CCDC13-208ENST00000492806 C7orf43Q8WVR3 580 aa21.08■□□□□ 0.97
CCDC13-208ENST00000492806 FER1L6Q2WGJ9 1857 aa21.07■□□□□ 0.96
CCDC13-208ENST00000492806 CSF1RP07333 972 aa21.07■□□□□ 0.96
CCDC13-208ENST00000492806 TAF1P21675 1872 aa21.07■□□□□ 0.96
CCDC13-208ENST00000492806 PPEF1O14829 653 aaPredicted RBP21.06■□□□□ 0.96
CCDC13-208ENST00000492806 C21orf2O43822 256 aa21.06■□□□□ 0.96
CCDC13-208ENST00000492806 NBPF7P0C2Y1 421 aaPredicted RBP21.06■□□□□ 0.96
CCDC13-208ENST00000492806 CCDC93Q567U6 631 aa21.06■□□□□ 0.96
CCDC13-208ENST00000492806 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
CCDC13-208ENST00000492806 TMX4Q9H1E5 349 aaPredicted RBP21.06■□□□□ 0.96
CCDC13-208ENST00000492806 GNAI3P08754 354 aa21.05■□□□□ 0.96
CCDC13-208ENST00000492806 FOXO4P98177 505 aa21.05■□□□□ 0.96
CCDC13-208ENST00000492806 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
CCDC13-208ENST00000492806 CDC5LQ99459 802 aaKnown RBP21.05■□□□□ 0.96
CCDC13-208ENST00000492806 UBTFL1P0CB47 393 aaPredicted RBP21.04■□□□□ 0.96
CCDC13-208ENST00000492806 RPS8P62241 208 aaKnown RBP21.04■□□□□ 0.96
CCDC13-208ENST00000492806 RTKN2Q8IZC4 609 aa21.04■□□□□ 0.96
CCDC13-208ENST00000492806 SUCLG2Q96I99 432 aa21.04■□□□□ 0.96
CCDC13-208ENST00000492806 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
CCDC13-208ENST00000492806 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
CCDC13-208ENST00000492806 SP8Q8IXZ3 490 aa21.03■□□□□ 0.96
CCDC13-208ENST00000492806 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
CCDC13-208ENST00000492806 SBF1O95248 1867 aa21.03■□□□□ 0.96
CCDC13-208ENST00000492806 LTBP3Q9NS15 1303 aa21.03■□□□□ 0.96
CCDC13-208ENST00000492806 LRRC37AA6NMS7 1700 aa21.02■□□□□ 0.96
CCDC13-208ENST00000492806 LMBR1LQ6UX01 489 aa21.02■□□□□ 0.96
CCDC13-208ENST00000492806 ANKRD18AQ8IVF6 992 aa21.02■□□□□ 0.96
CCDC13-208ENST00000492806 CELF1Q92879 486 aaKnown RBP21.02■□□□□ 0.96
CCDC13-208ENST00000492806 GREM2Q9H772 168 aa21.02■□□□□ 0.96
CCDC13-208ENST00000492806 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
CCDC13-208ENST00000492806 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
CCDC13-208ENST00000492806 RABL6Q3YEC7 729 aaPredicted RBP21.01■□□□□ 0.95
CCDC13-208ENST00000492806 EPHA10Q5JZY3 1008 aa21.01■□□□□ 0.95
CCDC13-208ENST00000492806 KAZALD1Q96I82 304 aa21.01■□□□□ 0.95
CCDC13-208ENST00000492806 CCDC85AQ96PX6 553 aaPredicted RBP21.01■□□□□ 0.95
CCDC13-208ENST00000492806 CCDC88AQ3V6T2 1871 aa21.01■□□□□ 0.95
CCDC13-208ENST00000492806 ANKRD18BA2A2Z9 1011 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 ITGA6P23229 1130 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 IFIT5Q13325 482 aaKnown RBP21■□□□□ 0.95
CCDC13-208ENST00000492806 PDE3AQ14432 1141 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 FAM161AQ3B820 660 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 MEIS3Q99687 375 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 BICC1Q9H694 974 aaKnown RBP21■□□□□ 0.95
CCDC13-208ENST00000492806 SNED1Q8TER0 1413 aa21■□□□□ 0.95
CCDC13-208ENST00000492806 NFKBIEO00221 500 aa20.99■□□□□ 0.95
CCDC13-208ENST00000492806 RLBP1P12271 317 aa20.99■□□□□ 0.95
CCDC13-208ENST00000492806 IGHMBP2P38935 993 aaKnown RBP20.99■□□□□ 0.95
CCDC13-208ENST00000492806 CCDC57Q2TAC2 916 aa20.99■□□□□ 0.95
CCDC13-208ENST00000492806 TAOK3Q9H2K8 898 aa20.99■□□□□ 0.95
CCDC13-208ENST00000492806 CHMP3Q9Y3E7 222 aa20.99■□□□□ 0.95
CCDC13-208ENST00000492806 DICER1Q9UPY3 1922 aaKnown RBP20.98■□□□□ 0.95
CCDC13-208ENST00000492806 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC13-208ENST00000492806 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
CCDC13-208ENST00000492806 PSMD1Q99460 953 aa20.98■□□□□ 0.95
CCDC13-208ENST00000492806 BSDC1Q9NW68 430 aaPredicted RBP20.98■□□□□ 0.95
CCDC13-208ENST00000492806 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
CCDC13-208ENST00000492806 LMNB1P20700 586 aa20.97■□□□□ 0.95
CCDC13-208ENST00000492806 ANKRD44Q8N8A2 993 aa20.97■□□□□ 0.95
CCDC13-208ENST00000492806 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
CCDC13-208ENST00000492806 CHMP4BQ9H444 224 aaKnown RBP20.97■□□□□ 0.95
CCDC13-208ENST00000492806 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
CCDC13-208ENST00000492806 COL4A1P02462 1669 aa20.96■□□□□ 0.95
CCDC13-208ENST00000492806 PLIN1O60240 522 aa20.96■□□□□ 0.95
CCDC13-208ENST00000492806 GNAI2P04899 355 aa20.96■□□□□ 0.95
CCDC13-208ENST00000492806 MPNDQ8N594 471 aa20.96■□□□□ 0.95
CCDC13-208ENST00000492806 SUPT20HQ8NEM7 779 aa20.96■□□□□ 0.95
CCDC13-208ENST00000492806 RASSF7Q02833 373 aa20.95■□□□□ 0.94
CCDC13-208ENST00000492806 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
CCDC13-208ENST00000492806 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
CCDC13-208ENST00000492806 RTFDC1Q9BY42 306 aaPredicted RBP20.95■□□□□ 0.94
CCDC13-208ENST00000492806 VPS33BQ9H267 617 aa20.95■□□□□ 0.94
CCDC13-208ENST00000492806 DDX19BQ9UMR2 479 aa20.95■□□□□ 0.94
CCDC13-208ENST00000492806 LRRFIP2Q9Y608 721 aaKnown RBP20.95■□□□□ 0.94
CCDC13-208ENST00000492806 ZBTB7BO15156 539 aaPredicted RBP20.94■□□□□ 0.94
CCDC13-208ENST00000492806 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
CCDC13-208ENST00000492806 TAF7LQ5H9L4 462 aa20.94■□□□□ 0.94
CCDC13-208ENST00000492806 DPP8Q6V1X1 898 aaPredicted RBP20.94■□□□□ 0.94
CCDC13-208ENST00000492806 PODXL2Q9NZ53 605 aa20.94■□□□□ 0.94
CCDC13-208ENST00000492806 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
CCDC13-208ENST00000492806 LTBP1Q14766 1721 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms