RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 TMC4Q7Z404 712 aa20.36■□□□□ 0.85
PKP4-214ENST00000492496 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
PKP4-214ENST00000492496 NEURL1BA8MQ27 555 aa20.35■□□□□ 0.85
PKP4-214ENST00000492496 PDE8AO60658 829 aa20.35■□□□□ 0.85
PKP4-214ENST00000492496 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
PKP4-214ENST00000492496 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
PKP4-214ENST00000492496 LRRC37AA6NMS7 1700 aa20.35■□□□□ 0.85
PKP4-214ENST00000492496 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
PKP4-214ENST00000492496 DPY19L2Q6NUT2 758 aa20.34■□□□□ 0.85
PKP4-214ENST00000492496 NMRK2Q9NPI5 230 aa20.34■□□□□ 0.85
PKP4-214ENST00000492496 ZNF277Q9NRM2 450 aaPredicted RBP20.34■□□□□ 0.85
PKP4-214ENST00000492496 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
PKP4-214ENST00000492496 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.85
PKP4-214ENST00000492496 LINS1Q8NG48 757 aa20.33■□□□□ 0.85
PKP4-214ENST00000492496 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
PKP4-214ENST00000492496 H7C1W4 665 aa20.31■□□□□ 0.84
PKP4-214ENST00000492496 GCKRQ14397 625 aa20.31■□□□□ 0.84
PKP4-214ENST00000492496 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
PKP4-214ENST00000492496 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
PKP4-214ENST00000492496 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
PKP4-214ENST00000492496 SUPT20HQ8NEM7 779 aa20.3■□□□□ 0.84
PKP4-214ENST00000492496 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
PKP4-214ENST00000492496 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
PKP4-214ENST00000492496 F6X3S4 739 aa20.29■□□□□ 0.84
PKP4-214ENST00000492496 CT47B1P0C2W7 299 aaPredicted RBP20.29■□□□□ 0.84
PKP4-214ENST00000492496 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
PKP4-214ENST00000492496 RTFDC1Q9BY42 306 aaPredicted RBP20.29■□□□□ 0.84
PKP4-214ENST00000492496 COL4A1P02462 1669 aa20.29■□□□□ 0.84
PKP4-214ENST00000492496 TOMM70O94826 608 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 CTSWP56202 376 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
PKP4-214ENST00000492496 BEND3Q5T5X7 828 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
PKP4-214ENST00000492496 UBE3BQ7Z3V4 1068 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 MPNDQ8N594 471 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
PKP4-214ENST00000492496 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
PKP4-214ENST00000492496 FZD9O00144 591 aa20.27■□□□□ 0.84
PKP4-214ENST00000492496 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.84
PKP4-214ENST00000492496 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
PKP4-214ENST00000492496 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
PKP4-214ENST00000492496 PLA2G12BQ9BX93 195 aa20.27■□□□□ 0.84
PKP4-214ENST00000492496 SCN4AP35499 1836 aa20.27■□□□□ 0.84
PKP4-214ENST00000492496 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 CASP7P55210 303 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 LARGE2Q8N3Y3 721 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 TTLL11Q8NHH1 800 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 SEC31BQ9NQW1 1179 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 PTPRCP08575 1304 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 COL4A5P29400 1685 aa20.26■□□□□ 0.83
PKP4-214ENST00000492496 DUOX1Q9NRD9 1551 aa20.25■□□□□ 0.83
PKP4-214ENST00000492496 DDNO94850 711 aaPredicted RBP20.25■□□□□ 0.83
PKP4-214ENST00000492496 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
PKP4-214ENST00000492496 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
PKP4-214ENST00000492496 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
PKP4-214ENST00000492496 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
PKP4-214ENST00000492496 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
PKP4-214ENST00000492496 ZNF541Q9H0D2 1346 aa20.24■□□□□ 0.83
PKP4-214ENST00000492496 POTECB2RU33 542 aa20.23■□□□□ 0.83
PKP4-214ENST00000492496 AOC3Q16853 763 aa20.23■□□□□ 0.83
PKP4-214ENST00000492496 ANKRD18AQ8IVF6 992 aa20.23■□□□□ 0.83
PKP4-214ENST00000492496 NIM1KQ8IY84 436 aa20.23■□□□□ 0.83
PKP4-214ENST00000492496 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
PKP4-214ENST00000492496 SRCIN1Q9C0H9 1055 aa20.23■□□□□ 0.83
PKP4-214ENST00000492496 EIF6P56537 245 aaKnown RBP20.22■□□□□ 0.83
PKP4-214ENST00000492496 KIAA2012Q0VF49 1180 aa20.22■□□□□ 0.83
PKP4-214ENST00000492496 SLC4A10Q6U841 1118 aa20.22■□□□□ 0.83
PKP4-214ENST00000492496 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
PKP4-214ENST00000492496 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
PKP4-214ENST00000492496 CSF1RP07333 972 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 GPSM2P81274 684 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 HNRNPUQ00839 825 aaKnown RBP eCLIP20.21■□□□□ 0.83
PKP4-214ENST00000492496 GPC2Q8N158 579 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 GREM2Q9H772 168 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
PKP4-214ENST00000492496 IQCA1LA6NCM1 817 aa20.2■□□□□ 0.82
PKP4-214ENST00000492496 GRM8O00222 908 aa20.2■□□□□ 0.82
PKP4-214ENST00000492496 FSTL1Q12841 308 aa20.2■□□□□ 0.82
PKP4-214ENST00000492496 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
PKP4-214ENST00000492496 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
PKP4-214ENST00000492496 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
PKP4-214ENST00000492496 ZNRF3Q9ULT6 936 aa20.19■□□□□ 0.82
PKP4-214ENST00000492496 WASHC4Q2M389 1173 aa20.18■□□□□ 0.82
PKP4-214ENST00000492496 EYA3Q99504 573 aa20.18■□□□□ 0.82
PKP4-214ENST00000492496 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
PKP4-214ENST00000492496 POLLQ9UGP5 575 aa20.18■□□□□ 0.82
PKP4-214ENST00000492496 C6orf229H3BNL8 230 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 HSPA6P17066 643 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 ITGA6P23229 1130 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 FOXO4P98177 505 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
PKP4-214ENST00000492496 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
PKP4-214ENST00000492496 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
PKP4-214ENST00000492496 ANKIB1Q9P2G1 1089 aa20.16■□□□□ 0.82
PKP4-214ENST00000492496 GGA1Q9UJY5 639 aa20.16■□□□□ 0.82
PKP4-214ENST00000492496 UTYO14607 1347 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms