RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
PTPRE-210ENST00000492479 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
PTPRE-210ENST00000492479 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
PTPRE-210ENST00000492479 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
PTPRE-210ENST00000492479 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
PTPRE-210ENST00000492479 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
PTPRE-210ENST00000492479 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-210ENST00000492479 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
PTPRE-210ENST00000492479 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 RHPN1Q8TCX5 695 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
PTPRE-210ENST00000492479 ANKRD31Q8N7Z5 1873 aa16.93■□□□□ 0.3
PTPRE-210ENST00000492479 SERPINB2P05120 415 aa16.93■□□□□ 0.3
PTPRE-210ENST00000492479 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
PTPRE-210ENST00000492479 PDE4AP27815 886 aa16.93■□□□□ 0.3
PTPRE-210ENST00000492479 GREM2Q9H772 168 aa16.93■□□□□ 0.3
PTPRE-210ENST00000492479 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
PTPRE-210ENST00000492479 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
PTPRE-210ENST00000492479 EYA2O00167 538 aa16.92■□□□□ 0.3
PTPRE-210ENST00000492479 ITGA6P23229 1130 aa16.92■□□□□ 0.3
PTPRE-210ENST00000492479 IL15P40933 162 aaPredicted RBP16.92■□□□□ 0.3
PTPRE-210ENST00000492479 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTPRE-210ENST00000492479 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
PTPRE-210ENST00000492479 ATG9AQ7Z3C6 839 aa16.92■□□□□ 0.3
PTPRE-210ENST00000492479 SASH1O94885 1247 aa16.91■□□□□ 0.3
PTPRE-210ENST00000492479 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
PTPRE-210ENST00000492479 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
PTPRE-210ENST00000492479 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
PTPRE-210ENST00000492479 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
PTPRE-210ENST00000492479 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
PTPRE-210ENST00000492479 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
PTPRE-210ENST00000492479 ST5P78524 1137 aa16.9■□□□□ 0.3
PTPRE-210ENST00000492479 A0A1B0GUL6 1792 aa16.89■□□□□ 0.3
PTPRE-210ENST00000492479 MMP10P09238 476 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-210ENST00000492479 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 AOX1Q06278 1338 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
PTPRE-210ENST00000492479 MSH5O43196 834 aa16.88■□□□□ 0.29
PTPRE-210ENST00000492479 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-210ENST00000492479 PLEKHM2Q8IWE5 1019 aa16.88■□□□□ 0.29
PTPRE-210ENST00000492479 PELP1Q8IZL8 1130 aaKnown RBP16.88■□□□□ 0.29
PTPRE-210ENST00000492479 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
PTPRE-210ENST00000492479 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
PTPRE-210ENST00000492479 COL4A1P02462 1669 aa16.88■□□□□ 0.29
PTPRE-210ENST00000492479 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-210ENST00000492479 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
PTPRE-210ENST00000492479 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
PTPRE-210ENST00000492479 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
PTPRE-210ENST00000492479 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
PTPRE-210ENST00000492479 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
PTPRE-210ENST00000492479 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
PTPRE-210ENST00000492479 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
PTPRE-210ENST00000492479 SIL1Q9H173 461 aa16.86■□□□□ 0.29
PTPRE-210ENST00000492479 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
PTPRE-210ENST00000492479 ZNF609O15014 1411 aa16.86■□□□□ 0.29
PTPRE-210ENST00000492479 LRRC37AA6NMS7 1700 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 COL11A2P13942 1736 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-210ENST00000492479 LRRC24Q50LG9 513 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 LDHAL6AQ6ZMR3 332 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
PTPRE-210ENST00000492479 SEC31BQ9NQW1 1179 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-210ENST00000492479 MROH5Q6ZUA9 1318 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
PTPRE-210ENST00000492479 TAF1P21675 1872 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
PTPRE-210ENST00000492479 RGS3P49796 1198 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-210ENST00000492479 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 TTC41PQ6P2S7 1318 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
PTPRE-210ENST00000492479 MX1P20591 662 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 PDE1AP54750 535 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 TFCP2Q12800 502 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 BMP2KLQ5H9B9 411 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 ANKRD18AQ8IVF6 992 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-210ENST00000492479 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-210ENST00000492479 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-210ENST00000492479 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-210ENST00000492479 MTFR1LQ9H019 292 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 CEP126Q9P2H0 1117 aa16.83■□□□□ 0.28
PTPRE-210ENST00000492479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-210ENST00000492479 APBB1O00213 710 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 NPHP1O15259 732 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms