RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-215ENST00000492451 GRIPAP1Q4V328 841 aa17.53■□□□□ 0.4
PTPN7-215ENST00000492451 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
PTPN7-215ENST00000492451 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
PTPN7-215ENST00000492451 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-215ENST00000492451 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.4
PTPN7-215ENST00000492451 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
PTPN7-215ENST00000492451 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
PTPN7-215ENST00000492451 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
PTPN7-215ENST00000492451 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
PTPN7-215ENST00000492451 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
PTPN7-215ENST00000492451 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
PTPN7-215ENST00000492451 ABCC4O15439 1325 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 CCDC88AQ3V6T2 1871 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 UBE3BQ7Z3V4 1068 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 TMC4Q7Z404 712 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
PTPN7-215ENST00000492451 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
PTPN7-215ENST00000492451 GLTPD2A6NH11 291 aa17.5■□□□□ 0.39
PTPN7-215ENST00000492451 POTECB2RU33 542 aa17.5■□□□□ 0.39
PTPN7-215ENST00000492451 GRAPQ13588 217 aa17.5■□□□□ 0.39
PTPN7-215ENST00000492451 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
PTPN7-215ENST00000492451 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-215ENST00000492451 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-215ENST00000492451 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
PTPN7-215ENST00000492451 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
PTPN7-215ENST00000492451 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
PTPN7-215ENST00000492451 MYH3P11055 1940 aa17.49■□□□□ 0.39
PTPN7-215ENST00000492451 CTSWP56202 376 aa17.48■□□□□ 0.39
PTPN7-215ENST00000492451 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTPN7-215ENST00000492451 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
PTPN7-215ENST00000492451 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
PTPN7-215ENST00000492451 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-215ENST00000492451 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
PTPN7-215ENST00000492451 GRM8O00222 908 aa17.47■□□□□ 0.39
PTPN7-215ENST00000492451 IPO8O15397 1037 aaKnown RBP17.47■□□□□ 0.39
PTPN7-215ENST00000492451 CASP7P55210 303 aa17.47■□□□□ 0.39
PTPN7-215ENST00000492451 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
PTPN7-215ENST00000492451 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
PTPN7-215ENST00000492451 PSMD1Q99460 953 aa17.47■□□□□ 0.39
PTPN7-215ENST00000492451 PLA2G12BQ9BX93 195 aa17.47■□□□□ 0.39
PTPN7-215ENST00000492451 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-215ENST00000492451 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
PTPN7-215ENST00000492451 TTLL11Q8NHH1 800 aa17.46■□□□□ 0.39
PTPN7-215ENST00000492451 TAF1P21675 1872 aa17.46■□□□□ 0.38
PTPN7-215ENST00000492451 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
PTPN7-215ENST00000492451 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
PTPN7-215ENST00000492451 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-215ENST00000492451 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
PTPN7-215ENST00000492451 HTRA3P83110 453 aa17.44■□□□□ 0.38
PTPN7-215ENST00000492451 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-215ENST00000492451 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
PTPN7-215ENST00000492451 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
PTPN7-215ENST00000492451 COL4A5P29400 1685 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 CSF1RP07333 972 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
PTPN7-215ENST00000492451 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 MPNDQ8N594 471 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 SUPT20HQ8NEM7 779 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 CCDC85AQ96PX6 553 aaPredicted RBP17.43■□□□□ 0.38
PTPN7-215ENST00000492451 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 UTYO14607 1347 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
PTPN7-215ENST00000492451 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
PTPN7-215ENST00000492451 BCAR3O75815 825 aa17.42■□□□□ 0.38
PTPN7-215ENST00000492451 DPP8Q6V1X1 898 aaPredicted RBP17.42■□□□□ 0.38
PTPN7-215ENST00000492451 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
PTPN7-215ENST00000492451 GREM2Q9H772 168 aa17.42■□□□□ 0.38
PTPN7-215ENST00000492451 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
PTPN7-215ENST00000492451 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
PTPN7-215ENST00000492451 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
PTPN7-215ENST00000492451 FOXO4P98177 505 aa17.41■□□□□ 0.38
PTPN7-215ENST00000492451 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
PTPN7-215ENST00000492451 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-215ENST00000492451 RTFDC1Q9BY42 306 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-215ENST00000492451 APLP1P51693 650 aa17.4■□□□□ 0.38
PTPN7-215ENST00000492451 FSTL1Q12841 308 aa17.4■□□□□ 0.38
PTPN7-215ENST00000492451 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
PTPN7-215ENST00000492451 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
PTPN7-215ENST00000492451 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-215ENST00000492451 ITGA6P23229 1130 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
PTPN7-215ENST00000492451 ZKSCAN2Q63HK3 967 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 HDAC5Q9UQL6 1122 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 COL4A1P02462 1669 aa17.39■□□□□ 0.37
PTPN7-215ENST00000492451 ANKRD18BA2A2Z9 1011 aa17.38■□□□□ 0.37
PTPN7-215ENST00000492451 IFIT5Q13325 482 aaKnown RBP17.38■□□□□ 0.37
PTPN7-215ENST00000492451 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
PTPN7-215ENST00000492451 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
PTPN7-215ENST00000492451 LMBR1LQ6UX01 489 aa17.38■□□□□ 0.37
PTPN7-215ENST00000492451 SMC1BQ8NDV3 1235 aa17.38■□□□□ 0.37
PTPN7-215ENST00000492451 BSDC1Q9NW68 430 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-215ENST00000492451 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
PTPN7-215ENST00000492451 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
PTPN7-215ENST00000492451 FZD9O00144 591 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms