RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	PRR5L	Q6MZQ0	368 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	CEP85	Q6P2H3	762 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	LMBR1L	Q6UX01	489 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	ANKRD44	Q8N8A2	993 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.18	□□□□□ -0.46
TRO-223	ENST00000492142	CHMP3	Q9Y3E7	222 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	HSP90B1	P14625	803 aa	Known RBP	12.17	□□□□□ -0.46
TRO-223	ENST00000492142	ST5	P78524	1137 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	B4GALNT3	Q6L9W6	998 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	CHRDL2	Q6WN34	429 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	SIRT2	Q8IXJ6	389 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.17	□□□□□ -0.46
TRO-223	ENST00000492142	CCDC136	Q96JN2	1154 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	PLA2G12B	Q9BX93	195 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	MTFR1L	Q9H019	292 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	COL24A1	Q17RW2	1714 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	ABCC12	Q96J65	1359 aa		12.17	□□□□□ -0.46
TRO-223	ENST00000492142	PNMA6E	A0A0J9YXQ4	647 aa		12.16	□□□□□ -0.46
TRO-223	ENST00000492142	SRGAP3	O43295	1099 aa		12.16	□□□□□ -0.46
TRO-223	ENST00000492142	CTSW	P56202	376 aa		12.16	□□□□□ -0.46
TRO-223	ENST00000492142	C3orf67	Q6ZVT6	689 aa		12.16	□□□□□ -0.46
TRO-223	ENST00000492142	REM2	Q8IYK8	340 aa	Predicted RBP	12.16	□□□□□ -0.46
TRO-223	ENST00000492142	TTLL11	Q8NHH1	800 aa		12.16	□□□□□ -0.46
TRO-223	ENST00000492142	RWDD1	Q9H446	243 aa	Predicted RBP	12.16	□□□□□ -0.46
TRO-223	ENST00000492142	IGHD	P01880	384 aa		12.15	□□□□□ -0.46
TRO-223	ENST00000492142	CSF1R	P07333	972 aa		12.15	□□□□□ -0.46
TRO-223	ENST00000492142	POLD1	P28340	1107 aa		12.15	□□□□□ -0.46
TRO-223	ENST00000492142	RABL6	Q3YEC7	729 aa	Predicted RBP	12.15	□□□□□ -0.46
TRO-223	ENST00000492142	NLRP3	Q96P20	1036 aa		12.15	□□□□□ -0.46
TRO-223	ENST00000492142	CASZ1	Q86V15	1759 aa		12.15	□□□□□ -0.46
TRO-223	ENST00000492142	HMMR	O75330	724 aa		12.14	□□□□□ -0.47
TRO-223	ENST00000492142	MTX1	Q13505	466 aa		12.14	□□□□□ -0.47
TRO-223	ENST00000492142	FAM161A	Q3B820	660 aa		12.14	□□□□□ -0.47
TRO-223	ENST00000492142	GREM2	Q9H772	168 aa		12.14	□□□□□ -0.47
TRO-223	ENST00000492142	HDAC1	Q13547	482 aa	Predicted RBP	12.13	□□□□□ -0.47
TRO-223	ENST00000492142	SF3B3	Q15393	1217 aa	Known RBP	12.13	□□□□□ -0.47
TRO-223	ENST00000492142	CCDC57	Q2TAC2	916 aa		12.13	□□□□□ -0.47
TRO-223	ENST00000492142	CCDC152	Q4G0S7	254 aa		12.13	□□□□□ -0.47
TRO-223	ENST00000492142	SSH3	Q8TE77	659 aa		12.13	□□□□□ -0.47
TRO-223	ENST00000492142	ZNF594	Q96JF6	807 aa	Predicted RBP	12.13	□□□□□ -0.47
TRO-223	ENST00000492142	BRIP1	Q9BX63	1249 aa		12.13	□□□□□ -0.47
TRO-223	ENST00000492142	PA2G4	Q9UQ80	394 aa	Known RBP	12.13	□□□□□ -0.47
TRO-223	ENST00000492142	DDX60	Q8IY21	1712 aa	Known RBP	12.13	□□□□□ -0.47
TRO-223	ENST00000492142	ANKRD18B	A2A2Z9	1011 aa		12.12	□□□□□ -0.47
TRO-223	ENST00000492142	ITGA6	P23229	1130 aa		12.12	□□□□□ -0.47
TRO-223	ENST00000492142	IFIT5	Q13325	482 aa	Known RBP	12.12	□□□□□ -0.47
TRO-223	ENST00000492142	KLHDC4	Q8TBB5	520 aa		12.12	□□□□□ -0.47
TRO-223	ENST00000492142	SEC31B	Q9NQW1	1179 aa		12.12	□□□□□ -0.47
TRO-223	ENST00000492142	MYH3	P11055	1940 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	APBB1	O00213	710 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	SURF6	O75683	361 aa	Known RBP	12.11	□□□□□ -0.47
TRO-223	ENST00000492142	PDE6B	P35913	854 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	RFX5	P48382	616 aa	Predicted RBP	12.11	□□□□□ -0.47
TRO-223	ENST00000492142	TAF7L	Q5H9L4	462 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	RPGR	Q92834	1020 aa	Known RBP	12.11	□□□□□ -0.47
TRO-223	ENST00000492142	SIL1	Q9H173	461 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	SPON1	Q9HCB6	807 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	NRXN2	Q9P2S2	1712 aa		12.11	□□□□□ -0.47
TRO-223	ENST00000492142	PTGER2	P43116	358 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	PTPN12	Q05209	780 aa	Known RBP	12.1	□□□□□ -0.47
TRO-223	ENST00000492142	OS9	Q13438	667 aa	Predicted RBP	12.1	□□□□□ -0.47
TRO-223	ENST00000492142	DDX46	Q7L014	1031 aa	Known RBP	12.1	□□□□□ -0.47
TRO-223	ENST00000492142	C2CD5	Q86YS7	1000 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	KLHL34	Q8N239	644 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	SGIP1	Q9BQI5	828 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	BCL11A	Q9H165	835 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	DCTPP1	Q9H773	170 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.1	□□□□□ -0.47
TRO-223	ENST00000492142	EXOC6B	Q9Y2D4	811 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	LAMB2	P55268	1798 aa		12.1	□□□□□ -0.47
TRO-223	ENST00000492142	KLRG2	A4D1S0	409 aa	Predicted RBP	12.09	□□□□□ -0.47
TRO-223	ENST00000492142		H0YIN7	160 aa		12.09	□□□□□ -0.47
TRO-223	ENST00000492142	CHRNA5	P30532	468 aa		12.09	□□□□□ -0.47
TRO-223	ENST00000492142	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
TRO-223	ENST00000492142	RBM17	Q96I25	401 aa	Known RBP	12.09	□□□□□ -0.47
TRO-223	ENST00000492142	PUS3	Q9BZE2	481 aa	Known RBP	12.09	□□□□□ -0.47
TRO-223	ENST00000492142	COPRS	Q9NQ92	184 aa		12.09	□□□□□ -0.47
TRO-223	ENST00000492142	RIC1	Q4ADV7	1423 aa		12.09	□□□□□ -0.47
TRO-223	ENST00000492142	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.09	□□□□□ -0.47
TRO-223	ENST00000492142	ANKRD31	Q8N7Z5	1873 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	RTL9	Q8NET4	1388 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	SRGN	P10124	158 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	NPR1	P16066	1061 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	IGHMBP2	P38935	993 aa	Known RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	RPS8	P62241	208 aa	Known RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	CRY2	Q49AN0	593 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	LRRC24	Q50LG9	513 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	LDHAL6A	Q6ZMR3	332 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	ANKRD18A	Q8IVF6	992 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142	CELF1	Q92879	486 aa	Known RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	CDC5L	Q99459	802 aa	Known RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	NOP58	Q9Y2X3	529 aa	Known RBP	12.08	□□□□□ -0.48
TRO-223	ENST00000492142	TAF1	P21675	1872 aa		12.08	□□□□□ -0.48
TRO-223	ENST00000492142		A0A0G2JLW4	131 aa		12.07	□□□□□ -0.48
TRO-223	ENST00000492142	EYA2	O00167	538 aa		12.07	□□□□□ -0.48
TRO-223	ENST00000492142	HOXA10	P31260	410 aa	Predicted RBP	12.07	□□□□□ -0.48
TRO-223	ENST00000492142	ANKRD45	Q5TZF3	282 aa		12.07	□□□□□ -0.48
TRO-223	ENST00000492142	SMC5	Q8IY18	1101 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms