RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 CRBNQ96SW2 442 aa19.81■□□□□ 0.76
NELFCD-211ENST00000492016 BICC1Q9H694 974 aaKnown RBP19.81■□□□□ 0.76
NELFCD-211ENST00000492016 LRRFIP2Q9Y608 721 aaKnown RBP19.81■□□□□ 0.76
NELFCD-211ENST00000492016 DDX60Q8IY21 1712 aaKnown RBP19.81■□□□□ 0.76
NELFCD-211ENST00000492016 ALDH1B1P30837 517 aa19.8■□□□□ 0.76
NELFCD-211ENST00000492016 EPHA10Q5JZY3 1008 aa19.8■□□□□ 0.76
NELFCD-211ENST00000492016 LMBR1LQ6UX01 489 aa19.8■□□□□ 0.76
NELFCD-211ENST00000492016 C3orf67Q6ZVT6 689 aa19.8■□□□□ 0.76
NELFCD-211ENST00000492016 ANKRD44Q8N8A2 993 aa19.8■□□□□ 0.76
NELFCD-211ENST00000492016 RPGRQ92834 1020 aaKnown RBP19.8■□□□□ 0.76
NELFCD-211ENST00000492016 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
NELFCD-211ENST00000492016 FHDC1Q9C0D6 1143 aaPredicted RBP19.8■□□□□ 0.76
NELFCD-211ENST00000492016 TNRC6CQ9HCJ0 1690 aaKnown RBP19.79■□□□□ 0.76
NELFCD-211ENST00000492016 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
NELFCD-211ENST00000492016 ANKRD31Q8N7Z5 1873 aa19.79■□□□□ 0.76
NELFCD-211ENST00000492016 RPAP2Q8IXW5 612 aaPredicted RBP19.78■□□□□ 0.76
NELFCD-211ENST00000492016 CNKSR1Q969H4 720 aa19.78■□□□□ 0.76
NELFCD-211ENST00000492016 SYT17Q9BSW7 474 aa19.78■□□□□ 0.76
NELFCD-211ENST00000492016 DPEP1P16444 411 aa19.77■□□□□ 0.76
NELFCD-211ENST00000492016 KCNA3P22001 575 aa19.77■□□□□ 0.76
NELFCD-211ENST00000492016 KLHL34Q8N239 644 aa19.77■□□□□ 0.76
NELFCD-211ENST00000492016 CDC5LQ99459 802 aaKnown RBP19.77■□□□□ 0.76
NELFCD-211ENST00000492016 GREM2Q9H772 168 aa19.77■□□□□ 0.76
NELFCD-211ENST00000492016 ANKRD18BA2A2Z9 1011 aa19.76■□□□□ 0.75
NELFCD-211ENST00000492016 CHRNA5P30532 468 aa19.76■□□□□ 0.75
NELFCD-211ENST00000492016 IFIT5Q13325 482 aaKnown RBP19.76■□□□□ 0.75
NELFCD-211ENST00000492016 CCDC57Q2TAC2 916 aa19.76■□□□□ 0.75
NELFCD-211ENST00000492016 TMC4Q7Z404 712 aa19.76■□□□□ 0.75
NELFCD-211ENST00000492016 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
NELFCD-211ENST00000492016 A0A0G2JLW4 131 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 BBOX1O75936 387 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 NEFLP07196 543 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 ITGA6P23229 1130 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 ATP8B2P98198 1209 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 GRAPQ13588 217 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 FAM161AQ3B820 660 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 CEP85Q6P2H3 762 aa19.75■□□□□ 0.75
NELFCD-211ENST00000492016 GRAPLQ8TC17 118 aaPredicted RBP19.75■□□□□ 0.75
NELFCD-211ENST00000492016 KIAA1551Q9HCM1 1747 aa19.74■□□□□ 0.75
NELFCD-211ENST00000492016 TTLL6Q8N841 843 aa19.74■□□□□ 0.75
NELFCD-211ENST00000492016 EXOC6Q8TAG9 804 aa19.74■□□□□ 0.75
NELFCD-211ENST00000492016 ZNF622Q969S3 477 aaKnown RBP eCLIP19.74■□□□□ 0.751e-8■□□□□ 10.9
NELFCD-211ENST00000492016 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
NELFCD-211ENST00000492016 MYH3P11055 1940 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
NELFCD-211ENST00000492016 ANKRD18AQ8IVF6 992 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 NLGN2Q8NFZ4 835 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 SSH3Q8TE77 659 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 C1orf115Q9H7X2 142 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 FBXO3Q9UK99 471 aa19.73■□□□□ 0.75
NELFCD-211ENST00000492016 SRGAP3O43295 1099 aa19.72■□□□□ 0.75
NELFCD-211ENST00000492016 HMMRO75330 724 aa19.72■□□□□ 0.75
NELFCD-211ENST00000492016 COL11A2P13942 1736 aaPredicted RBP19.72■□□□□ 0.75
NELFCD-211ENST00000492016 POLA2Q14181 598 aa19.72■□□□□ 0.75
NELFCD-211ENST00000492016 CCDC85AQ96PX6 553 aaPredicted RBP19.72■□□□□ 0.75
NELFCD-211ENST00000492016 SEC31BQ9NQW1 1179 aa19.72■□□□□ 0.75
NELFCD-211ENST00000492016 DLEC1Q9Y238 1755 aa19.72■□□□□ 0.75
NELFCD-211ENST00000492016 IGHMBP2P38935 993 aaKnown RBP19.71■□□□□ 0.75
NELFCD-211ENST00000492016 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
NELFCD-211ENST00000492016 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
NELFCD-211ENST00000492016 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
NELFCD-211ENST00000492016 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
NELFCD-211ENST00000492016 GRIPAP1Q4V328 841 aa19.7■□□□□ 0.74
NELFCD-211ENST00000492016 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
NELFCD-211ENST00000492016 TAF7LQ5H9L4 462 aa19.7■□□□□ 0.74
NELFCD-211ENST00000492016 CC2D2BQ6DHV5 1058 aa19.7■□□□□ 0.74
NELFCD-211ENST00000492016 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
NELFCD-211ENST00000492016 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
NELFCD-211ENST00000492016 COPRSQ9NQ92 184 aa19.7■□□□□ 0.74
NELFCD-211ENST00000492016 PNMA6EA0A0J9YXQ4 647 aa19.69■□□□□ 0.74
NELFCD-211ENST00000492016 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
NELFCD-211ENST00000492016 PTPN12Q05209 780 aaKnown RBP19.69■□□□□ 0.74
NELFCD-211ENST00000492016 SOGA3Q5TF21 947 aa19.69■□□□□ 0.74
NELFCD-211ENST00000492016 SP8Q8IXZ3 490 aa19.69■□□□□ 0.74
NELFCD-211ENST00000492016 MPHOSPH8Q99549 860 aa19.69■□□□□ 0.74
NELFCD-211ENST00000492016 CIAO1O76071 339 aa19.68■□□□□ 0.74
NELFCD-211ENST00000492016 TMX4Q9H1E5 349 aaPredicted RBP19.68■□□□□ 0.74
NELFCD-211ENST00000492016 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
NELFCD-211ENST00000492016 LDHAL6AQ6ZMR3 332 aa19.67■□□□□ 0.74
NELFCD-211ENST00000492016 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
NELFCD-211ENST00000492016 C7orf43Q8WVR3 580 aa19.67■□□□□ 0.74
NELFCD-211ENST00000492016 NOP58Q9Y2X3 529 aaKnown RBP19.67■□□□□ 0.74
NELFCD-211ENST00000492016 PCDHB15Q9Y5E8 787 aa19.67■□□□□ 0.74
NELFCD-211ENST00000492016 EYA2O00167 538 aa19.65■□□□□ 0.74
NELFCD-211ENST00000492016 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
NELFCD-211ENST00000492016 HSP90AB4PQ58FF6 505 aa19.65■□□□□ 0.74
NELFCD-211ENST00000492016 ZNF594Q96JF6 807 aaPredicted RBP19.64■□□□□ 0.73
NELFCD-211ENST00000492016 ANKRD2Q9GZV1 360 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 MINPP1Q9UNW1 487 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 BCS1LQ9Y276 419 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 RIPOR2Q9Y4F9 1068 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 MROH5Q6ZUA9 1318 aa19.64■□□□□ 0.73
NELFCD-211ENST00000492016 BRCA1P38398 1863 aaKnown RBP19.64■□□□□ 0.73
NELFCD-211ENST00000492016 IL15P40933 162 aaPredicted RBP19.63■□□□□ 0.73
NELFCD-211ENST00000492016 CCDC93Q567U6 631 aa19.63■□□□□ 0.73
NELFCD-211ENST00000492016 RTKN2Q8IZC4 609 aa19.63■□□□□ 0.73
NELFCD-211ENST00000492016 PODXL2Q9NZ53 605 aa19.63■□□□□ 0.73
NELFCD-211ENST00000492016 C21orf2O43822 256 aa19.62■□□□□ 0.73
NELFCD-211ENST00000492016 G3BP1Q13283 466 aaKnown RBP eCLIP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms