RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 RARSP54136 660 aaKnown RBP29.52■■■□□ 2.32
CPNE9-204ENST00000491802 OLFM4Q6UX06 510 aa29.52■■■□□ 2.32
CPNE9-204ENST00000491802 DDX46Q7L014 1031 aaKnown RBP29.52■■■□□ 2.32
CPNE9-204ENST00000491802 UBE3BQ7Z3V4 1068 aa29.52■■■□□ 2.32
CPNE9-204ENST00000491802 MYH3P11055 1940 aa29.51■■■□□ 2.32
CPNE9-204ENST00000491802 PDE8AO60658 829 aa29.5■■■□□ 2.31
CPNE9-204ENST00000491802 BBOX1O75936 387 aa29.5■■■□□ 2.31
CPNE9-204ENST00000491802 FKBP4Q02790 459 aaKnown RBP eCLIP29.5■■■□□ 2.31
CPNE9-204ENST00000491802 LRRC37AA6NMS7 1700 aa29.49■■■□□ 2.31
CPNE9-204ENST00000491802 H7C1W4 665 aa29.49■■■□□ 2.31
CPNE9-204ENST00000491802 GRAPQ13588 217 aa29.49■■■□□ 2.31
CPNE9-204ENST00000491802 GRAPLQ8TC17 118 aaPredicted RBP29.49■■■□□ 2.31
CPNE9-204ENST00000491802 PSMD1Q99460 953 aa29.49■■■□□ 2.31
CPNE9-204ENST00000491802 TAF1P21675 1872 aa29.48■■■□□ 2.31
CPNE9-204ENST00000491802 TMC4Q7Z404 712 aa29.48■■■□□ 2.31
CPNE9-204ENST00000491802 SLC51AQ86UW1 340 aa29.48■■■□□ 2.31
CPNE9-204ENST00000491802 SRCIN1Q9C0H9 1055 aa29.48■■■□□ 2.31
CPNE9-204ENST00000491802 GPBP1L1Q9HC44 474 aaPredicted RBP29.48■■■□□ 2.31
CPNE9-204ENST00000491802 ATP6V0A2Q9Y487 856 aa29.48■■■□□ 2.31
CPNE9-204ENST00000491802 BRPF1P55201 1214 aaPredicted RBP29.47■■■□□ 2.31
CPNE9-204ENST00000491802 ALDH1L1O75891 902 aa29.46■■■□□ 2.31
CPNE9-204ENST00000491802 CASP7P55210 303 aa29.46■■■□□ 2.31
CPNE9-204ENST00000491802 CTSWP56202 376 aa29.46■■■□□ 2.31
CPNE9-204ENST00000491802 CCDC152Q4G0S7 254 aa29.46■■■□□ 2.31
CPNE9-204ENST00000491802 NOB1Q9ULX3 412 aaKnown RBP29.46■■■□□ 2.31
CPNE9-204ENST00000491802 COL4A1P02462 1669 aa29.46■■■□□ 2.31
CPNE9-204ENST00000491802 KIF16BQ96L93 1317 aa29.45■■■□□ 2.31
CPNE9-204ENST00000491802 CCDC85AQ96PX6 553 aaPredicted RBP29.45■■■□□ 2.31
CPNE9-204ENST00000491802 SP8Q8IXZ3 490 aa29.44■■■□□ 2.3
CPNE9-204ENST00000491802 GRM8O00222 908 aa29.43■■■□□ 2.3
CPNE9-204ENST00000491802 CELF1Q92879 486 aaKnown RBP29.43■■■□□ 2.3
CPNE9-204ENST00000491802 PLA2G12BQ9BX93 195 aa29.42■■■□□ 2.3
CPNE9-204ENST00000491802 TMX4Q9H1E5 349 aaPredicted RBP29.42■■■□□ 2.3
CPNE9-204ENST00000491802 KDM2BQ8NHM5 1336 aa29.42■■■□□ 2.3
CPNE9-204ENST00000491802 API5Q9BZZ5 524 aaKnown RBP29.41■■■□□ 2.3
CPNE9-204ENST00000491802 SEC31BQ9NQW1 1179 aa29.41■■■□□ 2.3
CPNE9-204ENST00000491802 C9orf78Q9NZ63 289 aaPredicted RBP29.41■■■□□ 2.3
CPNE9-204ENST00000491802 BCAR3O75815 825 aa29.4■■■□□ 2.3
CPNE9-204ENST00000491802 TTLL11Q8NHH1 800 aa29.4■■■□□ 2.3
CPNE9-204ENST00000491802 VPS33BQ9H267 617 aa29.4■■■□□ 2.3
CPNE9-204ENST00000491802 RTL9Q8NET4 1388 aa29.39■■■□□ 2.3
CPNE9-204ENST00000491802 RTFDC1Q9BY42 306 aaPredicted RBP29.39■■■□□ 2.3
CPNE9-204ENST00000491802 GLTPD2A6NH11 291 aa29.38■■■□□ 2.29
CPNE9-204ENST00000491802 IARSP41252 1262 aaKnown RBP29.38■■■□□ 2.29
CPNE9-204ENST00000491802 ZNF526Q8TF50 670 aaPredicted RBP29.38■■■□□ 2.29
CPNE9-204ENST00000491802 GREM2Q9H772 168 aa29.38■■■□□ 2.29
CPNE9-204ENST00000491802 ZNF277Q9NRM2 450 aaPredicted RBP29.38■■■□□ 2.29
CPNE9-204ENST00000491802 LTBP1Q14766 1721 aa29.37■■■□□ 2.29
CPNE9-204ENST00000491802 WDR90Q96KV7 1748 aa29.37■■■□□ 2.29
CPNE9-204ENST00000491802 RPS8P62241 208 aaKnown RBP29.36■■■□□ 2.29
CPNE9-204ENST00000491802 KIF3CO14782 793 aa29.35■■■□□ 2.29
CPNE9-204ENST00000491802 FAM161AQ3B820 660 aa29.35■■■□□ 2.29
CPNE9-204ENST00000491802 SUPT20HQ8NEM7 779 aa29.35■■■□□ 2.29
CPNE9-204ENST00000491802 ARHGAP45Q92619 1136 aa29.35■■■□□ 2.29
CPNE9-204ENST00000491802 FRAT1Q92837 279 aaPredicted RBP29.35■■■□□ 2.29
CPNE9-204ENST00000491802 DUOX1Q9NRD9 1551 aa29.35■■■□□ 2.29
CPNE9-204ENST00000491802 CCT4P50991 539 aaKnown RBP29.34■■■□□ 2.29
CPNE9-204ENST00000491802 DPY19L2Q6NUT2 758 aa29.34■■■□□ 2.29
CPNE9-204ENST00000491802 CDC5LQ99459 802 aaKnown RBP29.34■■■□□ 2.29
CPNE9-204ENST00000491802 UTYO14607 1347 aa29.34■■■□□ 2.29
CPNE9-204ENST00000491802 IPO8O15397 1037 aaKnown RBP29.33■■■□□ 2.29
CPNE9-204ENST00000491802 NBPF7P0C2Y1 421 aaPredicted RBP29.33■■■□□ 2.29
CPNE9-204ENST00000491802 FOXO4P98177 505 aa29.33■■■□□ 2.29
CPNE9-204ENST00000491802 DPP8Q6V1X1 898 aaPredicted RBP29.33■■■□□ 2.29
CPNE9-204ENST00000491802 ANKRD18AQ8IVF6 992 aa29.33■■■□□ 2.29
CPNE9-204ENST00000491802 MPNDQ8N594 471 aa29.33■■■□□ 2.29
CPNE9-204ENST00000491802 CSF1RP07333 972 aa29.32■■■□□ 2.28
CPNE9-204ENST00000491802 EPHA10Q5JZY3 1008 aa29.32■■■□□ 2.28
CPNE9-204ENST00000491802 SUCLG2Q96I99 432 aa29.32■■■□□ 2.28
CPNE9-204ENST00000491802 COL4A5P29400 1685 aa29.31■■■□□ 2.28
CPNE9-204ENST00000491802 FZD9O00144 591 aa29.31■■■□□ 2.28
CPNE9-204ENST00000491802 TRIM27P14373 513 aa29.31■■■□□ 2.28
CPNE9-204ENST00000491802 ITGA6P23229 1130 aa29.31■■■□□ 2.28
CPNE9-204ENST00000491802 NMRK2Q9NPI5 230 aa29.31■■■□□ 2.28
CPNE9-204ENST00000491802 ATF7IPQ6VMQ6 1270 aa29.3■■■□□ 2.28
CPNE9-204ENST00000491802 CHMP3Q9Y3E7 222 aa29.3■■■□□ 2.28
CPNE9-204ENST00000491802 SPEF2Q9C093 1822 aa29.29■■■□□ 2.28
CPNE9-204ENST00000491802 LMBR1LQ6UX01 489 aa29.29■■■□□ 2.28
CPNE9-204ENST00000491802 JDP2Q8WYK2 163 aa29.29■■■□□ 2.28
CPNE9-204ENST00000491802 YTHDC1Q96MU7 727 aaKnown RBP29.29■■■□□ 2.28
CPNE9-204ENST00000491802 USP44Q9H0E7 712 aa29.29■■■□□ 2.28
CPNE9-204ENST00000491802 TNNQ9UQP3 1299 aa29.29■■■□□ 2.28
CPNE9-204ENST00000491802 C1QTNF8P60827 252 aa29.28■■■□□ 2.28
CPNE9-204ENST00000491802 KAZALD1Q96I82 304 aa29.28■■■□□ 2.28
CPNE9-204ENST00000491802 PODXL2Q9NZ53 605 aa29.28■■■□□ 2.28
CPNE9-204ENST00000491802 SCN4AP35499 1836 aa29.27■■■□□ 2.28
CPNE9-204ENST00000491802 GPSM2P81274 684 aa29.27■■■□□ 2.28
CPNE9-204ENST00000491802 ZKSCAN2Q63HK3 967 aa29.27■■■□□ 2.28
CPNE9-204ENST00000491802 NSFL1CQ9UNZ2 370 aaKnown RBP29.27■■■□□ 2.28
CPNE9-204ENST00000491802 ANKRD18BA2A2Z9 1011 aa29.26■■■□□ 2.27
CPNE9-204ENST00000491802 PPIP5K2O43314 1243 aa29.26■■■□□ 2.27
CPNE9-204ENST00000491802 IGHMBP2P38935 993 aaKnown RBP29.26■■■□□ 2.27
CPNE9-204ENST00000491802 KIAA2012Q0VF49 1180 aa29.26■■■□□ 2.27
CPNE9-204ENST00000491802 LARGE2Q8N3Y3 721 aa29.26■■■□□ 2.27
CPNE9-204ENST00000491802 IFIT5Q13325 482 aaKnown RBP29.25■■■□□ 2.27
CPNE9-204ENST00000491802 INTS3Q68E01 1043 aaKnown RBP29.25■■■□□ 2.27
CPNE9-204ENST00000491802 CLUAP1Q96AJ1 413 aa29.25■■■□□ 2.27
CPNE9-204ENST00000491802 L3MBTL3Q96JM7 780 aaPredicted RBP29.25■■■□□ 2.27
CPNE9-204ENST00000491802 BICC1Q9H694 974 aaKnown RBP29.25■■■□□ 2.27
CPNE9-204ENST00000491802 TOMM70O94826 608 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms